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Annual Call. These projects include cutting-edge research into microbial communities — from freshwater estuaries reshaped by dam removal to … degradation.  “We are  very excited to see the outcome of the innovative research  being proposed by this year’s …

UC Merced students and their JGI mentors toasted to the end of a nine-week virtual internship. The celebration was preceded by short final presentations attended by more than 75 JGI staff. According to Axel Visel … began in 2014, pairs undergraduate and graduate students from UC Merced with at least one JGI mentor. Together, they …

… and enabling data-driven science. This is a group of computational biologists, bioinformaticians, computer … the Wang group has developed customized data analyses and software to enable “grand-scale” scientific projects. These … metagenome binning software … Education … Selected Publications … Software …

… (scRNA-seq, Spatial Transcriptomics). … University of California, San Diego (PhD, 2011) Rensselaer Polytechnic Institute (B.S., 2006) … List of pubs available on NCBI … Implementation of the Index of Cell Identity as an R package … Education … Selected Publications … Software …

… causes Asian Soybean Rust (ASR) and is the major pathogen of soybean. Left uncontrolled, soybean rust could reduce crop yields by as much as 90 percent. As part of the DOE Joint Genome Institute’s  2016 Community Science Program portfolio , Sebastien Duplessis of the French National Institute for Agricultural Research …

… sequences to what they do. But sequencing the genome of one short plant — fire moss — had an unexpected …

… to further develop a more diverse and inclusive pool of talent for career opportunities at JGI and Berkeley Lab. …

… in the Environmental Genomics & Systems Biology Division of the Berkeley Lab Biosciences Area.] …

… a single protein. Recently reported in the Proceedings of the National Academy of Sciences , a team of researchers has found numerous examples of polycistronic …

With metagenomic sequencing, researchers have found more of these viruses than ever before, in all kinds of … use a variety of approaches to match a virus with a potential host. This can result in different predictions. The … iPHoP program brings several of these approaches together into the same workflow, then uses a machine-learning model …

… mentors Yi Zhai and John Vogel on researching the effects of Brachypodium distachyon plant root exudates on the plant … I’m Ti’Yanna Watson, a senior biology major and currently attending Alabama A&M University, and I am an aspiring … is Dr. Yi Zhai, and I’m currently working on the effect of plant root exudates in the rhizosphere and microbiome. …

… methods for reacting subsurface flows, and evolved into scalable methods for scientific data analysis. In 2014 … closely with staff to understand the data-intensive nature of JGI workloads. Dr. Fagnan was appointed CIO of the JGI in … … About the JGI Chief Informatics Officer … Selected Publications … Awards and Honors …