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The JGI Data Portal: Improving User Experience
… JGI Data Portal , a pilot download experience accessible from JGI’s plant portal Phytozome . Although the Data Portal … are more broadly applicable to the download processes from the other JGI Portals, as well. “For thousands of … areas of focus and data and computational needs. Over its 23-year history, JGI has produced more than 13 petabytes of …
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JGIota: Looking Back at Sequencing for Soybeans
… threatens this important crop. Hear more about that work from researchers Gary Stacey (University of Missouri), Peter …
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Pinning Down a Piece of Photosynthesis
… light microscope, and fickle, often hiding their function from even the most determined scientist.  Recent work in  … their groupings.  One pivotal effort along these lines came from UC Berkeley professor and longtime JGI collaborator … the structure and function of this protein. Starting from a gene, they’ve discovered an interesting zinc-mirror …
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The exceptional form and function of the giant bacterium Ca. Epulopiscium viviparus revolves around its sodium motive force
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Sequence to Function: Applications and Analysis for the Future (SFA²F)
… meeting brings together established and emerging scientists from academia, industry, and government organizations for …
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A Plantiful Future: Xiaohan Yang
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New Research Finds Flagella in the Terrestrial Roots of Marine Bacteria
… in an unexpected place: hot spring-dwelling bacteria from the phylum C hloroflexota . Research shows that … They were part of an ancient lineage of bacteria to migrate from oceans and colonize land. Terrestrial  Chloroflexota … extremes, where both temperatures and pH levels vary wildly from spring to spring. These biodiversity hotspots harbor …
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Panel Discussion: Launching & Sustaining Startups in Synthetic Biology
… Berkeley Lab Employees and Affiliates. When: August 29th, 3:00 pm – 5:30 pm 3:00 pm – 4:15 pm: Panel discussion, Q&A followed by: … Director, DOE Joint Genome Institute Read a synthesis from the panel discussion  here . Contact  Robin Johnston …
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Genome sequences of key bacterial symbionts of entomopathogenic nematodes: Xenorhabdus cabanillasii DSM17905, Xenorhabdus ehlersii DSM16337, Xenorhabdus japonica DSM16522, Xenorhabdus koppenhoeferii DSM18168, and Xenorhabdus mauleonii DSM17908
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Mike Sneddon
… bioinformatics pipelines and a laboratory information management (LIMS) system. He previously led the NGS Software … earned his PhD in Computational Biology and Bioinformatics from Yale University. … library and natural product discovery platform. WO2021163637A1 , PCT application PCT/US2021/018050 (published 2021). …
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How To Use Our Systems
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JGI@25: Building a Better Bean
… the common bean’s nutritional value, providing anywhere from 10-30% of daily protein requirements. It is also an essential … Six races of the common were identified, three from each of the common bean’s two points of origin in …
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