The standard operating procedure of the DOE-JGI Metagenome Annotation Pipeline (MAP v.4)
Results
Hydrothermal Vents and International Science: A Postdoc’s Visit to the JGI
MicroSyn: A user friendly tool for detection of microsynteny in a gene family
Sequencing and functional validation of the JGI Brachypodium distachyon T‐DNA collection
Nitrosococcus watsonii sp. nov., a new species of marine obligate ammonia‐oxidizing bacteria that is not omnipresent in the world's oceans: calls to validate the names ‘Nitrosococcus halophilus’ and ‘Nitrosomonas mobilis’
JGI Plant Gene Atlas: an updateable transcriptome resource to improve functional gene descriptions across the plant kingdom
Coming-of-Age Characterization of Soil Viruses: A User’s Guide to Virus Isolation, Detection within Metagenomes, and Viromics
Identifying Aspects of the Post-Transcriptional Program Governing the Proteome of the Green Alga Micromonas pusilla
DOE JGI Metagenome Workflow
Conserved unique peptide patterns (CUPP) online platform 2.0: implementation of +1000 JGI fungal genomes.
Supporting community annotation and user collaboration in the integrated microbial genomes (IMG) system
Gamete expression of TALE class HD genes activates the diploid sporophyte program in Marchantia polymorpha
