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A One-Stop Shop for Analyzing Algal Genomes
… genomic data on algae into one place, PhycoCosm allows users to easily compile data that answers what genes are … and understand. A team of researchers led by Algal Genomics Program lead Igor Grigoriev and data scientist Alan Kuo at … in the Nucleic Acids Research journal. The genome portal reinforces the JGI’s new strategic focus on exploring algal …
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Tracking the Origins of Methane-Producing Microbes
… (DOE) Joint Genome Institute (JGI), a DOE Office of Science user facility, report the discovery of a novel archaeum from … this approach through the Emerging Technologies Opportunity Program (ETOP). Following that work, they partnered once … some of the most pressing challenges of our time. For more information, please visit  energy.gov/science/office-science …
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Polar Phytoplankton Need Zinc to Cope with the Cold
… (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National … Laboratory (Berkeley Lab) through the JGI Community Science Program (CSP) .  Through this collaboration, in 2017, they … some of the most pressing challenges of our time. For more information, please visit  energy.gov/science/office-science …
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Frederik Schulz
… biogeochemical cycles. He provides his expertise to the JGI user community and supports various user projects in the Microbial Program. In an LDRD-funded project, Dr. Schulz established a … University of Vienna (Austria) PhD Microbial Ecology and Bioinformatics, University of Vienna (Austria) … Krinos et al. …
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New Vision, New Mission, New Plan: The JGI’s Next Five Years
… .) This plan aligns the DOE Office of Science user facility with broader national efforts to promote and … DOE Office of Biological and Environmental Research (BER) program. In service of solutions that will impact society, … “ By sharing our vision broadly across Berkeley Lab, with other user facilities, and with JGI users, we aim to foster …
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An Inside Look at How Plants and Mycorrhizal Fungi Cooperate
… (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National … 2021 Laboratory Directed Research and Development (LDRD) program. Cole also received a DOE  Early Career Research … this spatial transcriptomics data captured molecular information from both plant cells and fungal cells. “Because …
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An Inside Look at How Plants and Mycorrhizal Fungi Cooperate
… (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National … 2021 Laboratory Directed Research and Development (LDRD) program. Cole also received a DOE  Early Career Research … this spatial transcriptomics data captured molecular information from both plant cells and fungal cells. “Because …
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Triggering Morel Fruiting
… (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility,  reported on just how morel fruiting is … Fungal Genomes Project, which aims to provide genomic information for every family of fungi. In the following … by the black morel, as well as the gene-expression programs encoding the biochemical processes unveiled by …
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An Integrated Dataset to Understand Ecosystem Interaction
… (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National Laboratory (Berkeley Lab). All of this information — 318 metagenomes, 98 plant transcriptomes and … ) is supported by the Genomic Science Program in the U.S. Department of Energy, Office of Science, …
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NeLLi — Symposium on New Lineages of Life
… experimental approaches, computational innovations, and other technological advancements that facilitate the shift … New Lineages of Life Lead Emiley Eloe-Fadrosh, Metagenome Program Tanja Woyke, Microbial Program Robert Bowers,  User Project Coordination Rekha Seshadri,  Functional …
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A Community Resource for Secondary Metabolite Researchers
The Secondary Metabolism Collaboratory encourages user engagement. The Science In addition to the core set of … biosynthetic gene clusters and secondary metabolites information from isolate and metagenome data.   The SMC ( … data, as well as to connect and collaborate with each other in a public forum. Second, SMC provides an opportunity …
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A Complex Confection Decoded: Sugarcane Reference Genome
… sugarcane  genome , the JGI provides foundational genetic information that crop breeders can use to improve sugarcane … (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National … The work was partly enabled by the JGI’s Community Science Program; in 2018, a monoploid reference sequence of …
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