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A Better Way to Find RNA Virus Needles in the Proverbial Database Haystacks
Team develops a computational pipeline to sift and … researchers at Tel Aviv University in Israel, the National Center for Biotechnology Information, and the U.S. … cell, RNA viruses store their genetic information in RNA without a DNA stage. “I would argue RNA viruses globally are …
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An Inside Look at How Plants and Mycorrhizal Fungi Cooperate
A new view into a symbiosis could offer benefits to address … their cells around this structure to facilitate sharing.  Recently, researchers have been able to study both sides of … two different organisms] are interacting with each other, without all the noise or other biological activity of the …
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An Inside Look at How Plants and Mycorrhizal Fungi Cooperate
A new view into a symbiosis could offer benefits to address … their cells around this structure to facilitate sharing.  Recently, researchers have been able to study both sides of … two different organisms] are interacting with each other, without all the noise or other biological activity of the …
Learn more
Genome Sequences of Industrially Relevant Saccharomyces cerevisiae Strain M3707, Isolated from a Sample of Distillers Yeast and Four Haploid Derivatives
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Partnering with CalTeach – Training the Next Generation STEM Workforce
As set out in the JGI Five-Year Strategic Plan – “Beyond Basepairs, A Vision for Integrative and  …
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2024 Progress Report
The Integrative Genomics Building (IGB) seen above is home to the DOE Joint Genome Institute (JGI). … to Serve the Changing Planet , was released in April. It centers our work on four strategic themes: Nutrient Cycling, …
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JGI Scientists Pen Genome Watch Articles
Tanja Woyke and other JGI researchers made their debut writing for the Nature Reviews …
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An Automated Tool for Assessing Virus Data Quality
CheckV can help researchers assess virus sequence fragments and data quality. … in the viral genome versus those from the host organism. Without this prediction step, numerous genes for antibiotic …
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How to Target a Microbial Needle within a Community Haystack
A workflow for capturing the genetic make-up of specific … contrast to standard FISH where a one probe adds one fluorescent molecule when bound to a target, HCR-FISH attaches … found that ethanol treatment improved fluorescence signals without hampering subsequent DNA amplification and …
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Doubling Down on Known Protein Families
Using a novel computational approach, researchers confirm … Lab), and collaborators across multiple other research centers around the world. “We’ve more than doubled the … communities via whole genome sequencing of the samples, without being able to distinguish which gene belongs to each …
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Giant Bacteria Found in Guadeloupe Mangroves Challenge Traditional Concepts
Though visible to the naked eye, microscopy reveals unexpected complexity At first glance, the slightly … size is notable because bacteria aren’t usually visible without the assistance of microscope. “It’s 5,000 times …
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JGI Hosts GPU Hackathon in May
WHEN: May 6-10, 2019 WHERE: JGI With DOE investments in graphical processing unit (GPU)-based high-performance computing …
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