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JGI@25 RECAP: 2022 Annual Meeting features historical perspectives on JGI’s 25 years
… and environmental communities that have relevance for DOE’s bioenergy and environmental goals. While he’s very familiar … multiple DOE facilities with a single proposal. From the vantage point of JGI’s 25 years fueling discovery, Anderson …
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Mapping the Earth’s Hidden Fungal Kingdom
… metabolites, and other parts lists for biotechnology, bioenergy and biomaterials,” said Igor Grigoriev, head of … toward 10,000 annotated genomes, this infrastructure advantage becomes even more critical. With roughly half of all …
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DAP-seq Drives Robust Mapping of Gene Regulation
… advancement holds the potential to expand opportunities for bioenergy and bioengineering applications. “We worked with …
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GenomeOcean Leverages AI to Decode Nature’s Secret Language
… the genome as if it were a language, then we can take advantage of existing methodologies developed for natural … efficiency of its modeling in the early testing stages. By aiding the understanding of patterns in large … the broader research community, some people from the Joint Bioenergy Institute (JBEI), because they really want to …
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A Revamped Amplification Method that Enables Nearly Complete Single-Cell Genomes
… scientists usually employ two different methods; shotgun metagenomic sequencing and single-cell sequencing. For years, … genomes from microorganisms are shotgun (group) metagenomic sequencing and single-cell (individual) sequencing. Shotgun metagenomic sequencing takes much less time than its …
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Ray Turner Completes Last Tour of Lab Duty at JGI
… 2008. Ray won the  Director’s Award for Operations in 2017 in recognition of his tireless efforts to ensure the … Division and then to Chief Operating Officer for the Joint BioEnergy Institute and Deputy for Operations Biological …
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How to Target a Microbial Needle within a Community Haystack
… of the microbial world through bulk community sequencing (metagenomics) and single-cell genomics, the vast majority of … allow researchers to focus on specific microbes within metagenome samples and associate their sequences with their … their environments. Summary The traditional shotgun metagenomics approach to learning more about environmental …
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Complete Genome of Oil-Rich Alga Reveals Ideal Platform for Bioengineering
… is remarkably simple with only 7,500 genes, compared to 17,000 in the model alga Chlamydomonas . The genome is also … oil production. The organism uses specific chemical tags on DNA  to control which genes are active. Researchers …
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Open Frameworks Training the Next Generation of Scientists
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JGI@25: Following Fungi that Pry Apart Plant Polymers
… genomics and transcriptomics to discover another advantage these fungi wield: the capacity to form enzyme …
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The Surprising Structure of a Shrub Willow Sex Chromosome
… some songbird W chromosomes — suggest that they are advantageous enough to have evolved multiple times independently. … National Key Research and Development Program of China (2017YFC0505203, 2016YFD0600101), and the National Key Project …
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Virus Discoveries that Keep Getting Bigger
… Sequence-based studies — from metagenomics to single-cell work — have quickly accelerated … virus reference genomes to search for giant viruses in metagenomic reads. Another approach, single cell methods — … genome, to sift for snippets of giant viruses in metagenomes. This has been useful in marine environments, …
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