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… focuses on using genome-resolved metagenomic approaches to identify and characterize genomic information from … microbes and viruses. We develop computational approaches to sift through thousands of metagenomes for signatures of viruses and novel microbial …

The focus of this group, in recent years, has been to bring generalizable technologies to bacteria, yeasts and algae previously with little to no …

Software engineers in the Synthetic Biology Informatics Group … gRNA-SeqRET , an organism-agnostic CRISPR gRNA design tool BOOST , which provides a suite of tools to automate sequence design for assembly by Gibson, …

Our lab is using mass spectrometry based metabolite profiling to provide direct biochemical datasets to improve our understanding of microbial metabolism. Of …

… computing consultant, after completing a petascale postdoctoral fellowship at NERSC and LBNL’s Computational Research … closely with staff to understand the data-intensive nature of JGI workloads. Dr. Fagnan was appointed CIO of the JGI in … for the National Microbiome Data Collaborative where she leads infrastructure and user-centered design efforts. … PhD …

Dr. Yasuo Yoshikuni has been head of the DNA Synthesis Science Program since 2015. The mission of this program is to harness the power of DNA synthesis, strain engineering, and biosystems design for DOE-mission-relevant discovery and applications. This program has supported over …

Congratulations to Susannah Tringe , one of eight scientists and engineers who received the 2020 … Division, and JGI’s deputy for user programs. She also leads the JGI’s Microbial Systems group. The award ceremony …

… is now applying his internship lessons on presentations to peatlands Travis Lawrence sits in his backyard in … research related to how bacteria that colonize the roots of sphagnum work to transfer their thermotolerance abilities. … would best serve their quests related to processing RNA-sequencing information. According to Lawrence, this summer …

In the summer of 2015, Adam Session was a postdoc working at the DOE Joint … Nowadays, Session is an Assistant Professor at Binghamton University in New York. He and Rokhsar have  recently … codes of plants is often challenging because in many plants chromosomes are present in more than two copies, a condition …

… communities than ever before — especially with the prospect of meta-analyses boosted by AI and Machine Learning — JGI researchers and collaborators work to create FAIR datasets to maximize returns on … catalyzed by microbial communities. By pairing RNA or DNA sequencing with tracings of stable, heavy isotopes, SIP …

Large-scale comparative analysis leads to identification of biosynthetic gene clusters for novel … for multiple applications.       Despite advances in sequencing technologies and computational methods in the …

For the Joint Genome Institute, the end of 2018 was marked by a celebration of contributing over one … “petabase” – a quadrillion nucleotide bases of DNA sequence to the public data repositories over its now 20-plus-year … our near- and long-term goals. And, by the way, as far as sequencing goes, the JGI’s next petabase will likely be …