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Fungal Friends or Foes in Plant Roots
… Uncovering associations between plant roots and fungi that can help or … health and diversity, which can in turn boost yields for both food and for candidate bioenergy feedstock crops. … from natural Arabidopsis populations around Europe. The JGI sequenced and annotated 41 fungal isolates from the …
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The More the Merrier: Making the Case for Plant Pan-genomes
… Brachypodium model system traces polyploid genome evolution. … returning their genomes to a diploid state while retaining multiple copies of some genes. This polyploidization process … Laboratory (Berkeley Lab), relied on a model grass system for answers. Their work  recently appeared in  Nature …
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Multiple sources of aerobic methane production in aquatic ecosystems include bacterial photosynthesis
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Simple and Rapid Site-Specific Integration of Multiple Heterologous DNAs into the Escherichia coli Chromosome
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DNA Sequence Analysis of an Inversion Hot Spot in Lobeliaceae Plastomes
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A vast collection of microbial genes that are toxic to bacteria
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Danielle Goudeau
… Danielle operates the single-cell genomics pipeline for JGI collaborators. This work combines custom flow cytometric analysis, cell sorting, genome amplification, PCR screening, …
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Dan Rokhsar
… Dr. Rokhsar joined the JGI in 2000 as the founding Associate Director for Computational Genomics, and led the computational … and animals by combining computational genome analysis, sequence-based genetic methods, and comparative … AB in Physics, Princeton University, NJ MS in Theoretical …
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Olpidium, The Key to the Origin of Terrestrial Fungi
… Before 2006, Olpidium was one of the many obscure fungi of Chytridiomycota (the … attracted the attention of many mycologists with the two publications of the kingdom-wide, multi-gene phylogeny of … non-flagellated terrestrial fungi suggested that there were multiple flagellum loss events during the diversification of …
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Comparative Transcriptome and Secretome Analysis of Wood Decay Fungi Postia placenta and Phanerochaete chrysosporium▿ †
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Comparative Metagenomic and Metatranscriptomic Analysis of Hindgut Paunch Microbiota in Wood- and Dung-Feeding Higher Termites
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Comparative Genomic Analysis of the Endosymbionts of Herbivorous Insects Reveals Eco-Environmental Adaptations: Biotechnology Applications
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