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Engagement Webinar: Utilizing long-read sequencing for metagenomics and DNA modification detection
… This webinar focused on how the JGI employs single-molecule, long-read DNA sequences to aid with genome assembly and transcriptome … submit?  How deeply are metagenomes sequenced? A:  For the next call ( CSP New Investigator ), up to 4 long-reads … The U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility …
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Exploring microbial functional biodiversity at the protein family level—From metagenomic sequence reads to annotated protein clusters
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A Sorghum Pangenome Opens More Doors to Discovery
… Leveraging decades of technological development, dozens of reference genomes and thousands of resequenced sorghum varieties, a resource for breeders and … Development (USAID) also supported the work.   Publication:  Morris, G.P., Harder, A.M., Healey, A.L.  et …
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Sequence to Function: Applications and Analysis for the Future (SFA²F)
… The Sequence to Function: Applications and Analysis for the Future (SFA²F) meeting brings together established and emerging scientists from … and informal networking events. JGI will present both a genome center talk and a tech talk. Stop by the JGI booth to …
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From Intern to Published Scientist: The Journey of a JGI-UC Merced Intern
… current PhD student, reached this milestone with a recent publication in Molecular Biology and Evolution . “It’s my … factors and mechanics of gene expression in over 400 fungi species. “Fungi are the masters of adaptation,” Wint … applications, Wint also developed and tested a gene sequence-based predictor of gene expression levels using …
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Complete genome sequence of Jiangella gansuensis strain YIM 002T (DSM 44835T), the type species of the genus Jiangella and source of new antibiotic compounds
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Enabling pan-repository reanalysis for big data science of public metabolomics data
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Four chromosome scale genomes and a pan-genome annotation to accelerate pecan tree breeding
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The standard operating procedure of the DOE-JGI Microbial Genome Annotation Pipeline (MGAP v.4)
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Exploiting proteomic data for genome annotation and gene model validation in Aspergillus niger
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Supporting community annotation and user collaboration in the integrated microbial genomes (IMG) system
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FunGAP: Fungal Genome Annotation Pipeline using evidence-based gene model evaluation.
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