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In Hot Spring Microbial Mat, Viruses Ride “Piggyback”
… For the first time, a team has comprehensively described host-virus dynamics in a microbial mat. The Science In microbial mats, communities of microorganisms live among … The work conducted by the U.S. Department of Energy Joint Genome Institute, a DOE Office of …
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Defining a Pan-Genome for Antarctic Archaea
… Analysis of haloarchaeal metagenomes broadens understanding … adapt from marine to hypersaline conditions by studying the microbial communities in Antarctic lakes, some of which have … haloarchaea and the structure and extent of the Antarctic microbial pan-genome. Since these microbes thrive under …
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Natural Prodcast Episode 21: Elizabeth Parkinson
… DAN: All right. Welcome back to Natural Prodcast. I did it. … outreach program to get kids interested in microbiology and microbial chemistry. All good stuff, and I hope you enjoy … thinking about mental health for graduate students. And so during the time that I have been an assistant professor with …
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Understanding Wildfire Recovery, Starting in Soil
… A metagenomic look at the soil microbes present a year after … return to health, researchers have taken a look at microbial genomes across a spectrum of burned soils. By connecting microbial genes with functions useful for forest recovery, … This work was supported through a USDA NIFA award (2021-67019-34608) to …
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JGI@25: A Single Cell, Myriad Microbial Discoveries
… In honor of the JGI's 25th anniversary in 2022, we have revisited a number of notable … and offered a way for researchers to study the planet’s microbial diversity, much of which remains unknown and … the JGI and Bigelow Lab led to the identification of key microbial culprits in carbon fixation in the dark ocean. …
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Accelerating Metagenomics Discoveries with Deep Learning
… On July 6, scientists from Lawrence Berkeley National Laboratory (Berkeley Lab) and other institutions … Lab’s Biological Systems and Engineering), to assign microbial taxa (Andrew Tritt of CRD and, independently, Ying … The U.S. Department of Energy Joint Genome Institute, a DOE Office of …
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Data Ecosystem
… The JGI is leveraging its current partnerships to offer new capabilities and resources to users through a BER data … Through its partnership with NERSC and the DOE Energy Sciences Network (ESNet), the JGI has … scales ranging from single genes and individual genomes to metagenomes to systems-level modeling and understanding. JGI …
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Microbial life under ice: Metagenome diversity and in situ activity of Verrucomicrobia in seasonally ice‐covered Lakes
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Impact of fire on active layer and permafrost microbial communities and metagenomes in an upland Alaskan boreal forest
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Structure determination of the HgcAB complex using metagenome sequence data: insights into microbial mercury methylation
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Metatranscriptomic insights on gene expression and regulatory controls in Candidatus Accumulibacter phosphatis
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Digging into Microbial Ecosystems Deep Underground
… “Microbes underpin so much of what we see on earth in terms of nutrient cycles and biogeochemical cycles…. … at Colorado State University have many questions about the microbial communities deep underground, and before the …
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