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A Functional Mini-Integrase in a Two-Protein Type V-C CRISPR System
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A genomic analysis of the archaeal system Ignicoccus hospitalis-Nanoarchaeum equitans
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Bacterial genome editing by coupling Cre-lox and CRISPR-Cas9 systems
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Tracing the Evolution of Shiitake Mushrooms
… 60 existing sequences, this work expands the family tree for Lentinula. Within those samples, this study also tracks … enzymes these fungi use to break down wood, and compares genetic diversity between cultivated and wild shiitake … atmospheric carbon dioxide.  Summary Researchers sequenced 11 samples from Asia–Australasia and 13 samples from the …
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Calculating the Costs of Multiple Switchgrass Gene Copies
… of Texas (UT) at Austin, the HudsonAlpha Institute for Biotechnology (HudsonAlpha), and the U.S. Department of … of switchgrass and is a key component in providing genetic variation available for selection to improve biofuel … of genomic, quantitative genetic, landscape, and niche modeling approaches, we contrasted the diversity of 4X and …
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JGI announces 2025 Functional Genomics awardees
… Benjamin Woolston. ] Each year, the JGI accepts proposals for state-of-the-art functional genomics research from … transcriptional network mapping, developing microbial systems to convert renewable feedstocks into advanced … integrate cutting-edge genomic data with predictive modeling and bioengineering to advance U.S. energy …
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Contrasting Community Assembly Forces Drive Microbial Structural and Potential Functional Responses to Precipitation in an Incipient Soil System
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The Genomes OnLine Database (GOLD) v.5: a metadata management system based on a four level (meta)genome project classification
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Webinar: MycoCosm Tutorial
… While are still working on finalizing the tree and related publication the tree is still in development and not … of annotation or manual curation they are searchable. For model fungi, not sequenced by JGI and adopted by large … 142 of them that are not only conserved across large phylogenetic distances, but have an unknown or poorly …
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Experimentally Validated Reconstruction and Analysis of a Genome-Scale Metabolic Model of an Anaerobic Neocallimastigomycota Fungus
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High intraspecific genome diversity in the model arbuscular mycorrhizal symbiont Rhizophagus irregularis
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Exploiting proteomic data for genome annotation and gene model validation in Aspergillus niger
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