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Genome-wide prediction and transcriptome analysis of sugar transporters in four ascomycete fungi
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A User-Centered Approach to Accessing JGI Data
… launched last year, it was only accessible through the plant portal  Phytozome . Now the portal offers … data sets within groups, such as plants (via Phytozome) or fungi ( MycoCosm ). “We have made a concerted effort to … requires that users know about the FY Funding Year, and the publication status in addition to the public/private status. …
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Elucidating Drought-Tolerance Mechanisms in Plant Roots through 1H NMR Metabolomics in Parallel with MALDI-MS, and NanoSIMS Imaging Techniques
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Enhanced terrestrial Fe(II) mobilization identified through a novel mechanism of microbially driven cave formation in Fe(III)-rich rocks
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2021 JGI Proposal Call Brings New Investigators into Community Science Program
… metabolites. A total of 27 proposals have been  approved through the annual  Community Science Program (CSP) call of … hot springs and acid mining sites, traits that might have biotechnological applications.   Among the other accepted … is interested in understanding which species of mycorrhizal fungi are important for poplar plant health, in part to …
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Tracing the Evolution of Shiitake Mushrooms
… New genomes highlight the diversity of white rot fungi in the genus Lentinula   The Science Shiitake … — the shii tree, a Japanese relative of the oak. These fungi are part of the genus Lentinula, which have evolved to … those samples, this study also tracks the enzymes these fungi use to break down wood, and compares genetic diversity …
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Viral Genomics Group
… Selected Publications …
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Marchantia Pangenome Highlights Adaptive Nature of Plant Lineages
… Facility located at Lawrence Berkeley National Laboratory through the Community Science Program . The comparative … is key to understanding its full evolutionary history. Through studies of the  Marchantia pangenome, scientists … With the information about  Marchantia -specific innovations and adaptations, scientists want to take a …
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Genome-Resolved Meta-Omics Ties Microbial Dynamics to Process Performance in Biotechnology for Thiocyanate Degradation
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The United States Culture Collection Network (USCCN): Enhancing Microbial Genomics Research through Living Microbe Culture Collections
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Comparative genomics reveals dynamic genome evolution in host specialist ectomycorrhizal fungi
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Proteome specialization of anaerobic fungi during ruminal degradation of recalcitrant plant fiber
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