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JGI-Enabled Research Demonstrates the Existence of New Methane-Makers
Earth’s climate. Most methane is produced in environments without oxygen through a process called methanogenesis. … to  Euryarchaeota .  Finding Methane-Making Microbes with Metagenomics  By leveraging metagenomics to sample the … and computational analysis that enable systems-based scientific approaches to these challenges.  DOE’s Office of …
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Understanding Wildfire Recovery, Starting in Soil
… a wildfire burns, recovery begins at the forest floor. Within the soil, a microbiome of bacteria, viruses and fungi process carbon and nitrogen, paving the way for future plants and trees to grow. However, fire changes the … interact; beyond bacteria, these samples harbored fungal genomes, including a novel Leotiomycetes species and …
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Fungal Endophytes of Populus trichocarpa Alter Host Phenotype, Gene Expression, and Rhizobiome Composition.
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Kingdom-Wide Analysis of Fungal Protein-Coding and tRNA Genes Reveals Conserved Patterns of Adaptive Evolution
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Fungal community assembly in drought-stressed sorghum shows stochasticity, selection, and universal ecological dynamics
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A fungal transcription factor essential for starch degradation affects integration of carbon and nitrogen metabolism
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Fungal ecological strategies reflected in gene transcription ‐ a case study of two litter decomposers
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Reactive iron, not fungal community, drives organic carbon oxidation potential in floodplain soils
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Fungal community response to long‐term soil warming with potential implications for soil carbon dynamics
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Jeremy Schmutz
Mr. Schmutz’s involvement with the DOE Joint Genome Institute dates back to 1997, when … and DOE relevant cellulosic feedstocks. Schmutz provides scientific project management for the reference eukaryotic … Award … Plant Science Program … Education … Selected Publications … Awards and Honors …
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Comparative Transcriptome Analysis of Methylibium petroleiphilum PM1 Exposed to the Fuel Oxygenates Methyl tert-Butyl Ether and Ethanol▿ †
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Enlarging Windows into Understanding Gene Functions
… workflow that reduces the time and cost associated with this purification step, and Baumgart continued and … the JGI’s Community Science Program (CSP) focuses on a fungal comparative ENCODE project known as FUNCODE. “We … and computational analysis that enable systems-based scientific approaches to these challenges.  DOE’s Office of …
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