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Two new high-resolution crystal structures of carboxysome pentamer proteins reveal high structural conservation of CcmL orthologs among distantly related cyanobacterial species
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JGI Portals
… and analytical tools for all JGI sequencing projects. In 2021, the JGI launched the Data Portal to eventually replace …
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FICUS
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Tanja Woyke
… assumed the Deputy Director of User Program position in 2021. In addition to her JGI appointment, she also holds an … components. Science 356, 82-85. Tsementzi et al. 2016. SAR11 bacteria linked to ocean anoxia and nitrogen loss. Nature … chemoautotrophic symbiont genome. Science 315, 998-1000. Woyke et al. 2006. Symbiosis insights through …
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Nitrosococcus watsonii sp. nov., a new species of marine obligate ammonia‐oxidizing bacteria that is not omnipresent in the world's oceans: calls to validate the names ‘Nitrosococcus halophilus’ and ‘Nitrosomonas mobilis’
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Fungal & Algal Program
… biocontrol agents dramatically affect plant health. The  1000 Fungal Genomes Project is a five-year project to sequence 1000 fungal genomes from across the Fungal Tree of Life, …
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Novel heavy metal resistance gene clusters are present in the genome of Cupriavidus neocaledonicus STM 6070, a new species of Mimosa pudica microsymbiont isolated from heavy-metal-rich mining site soil
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Frequently Asked Questions: Proposal Submission
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Single Cell Research Group
… through global metagenomics.” Nature 578(7795): 432-436 (2020). Seshadri R., Leahy S. C., Attwood G. T., Teh K. H., … and sequencing of rumen microbiome members from the Hungate1000 Collection.” Nat Biotechnol 36(4): 359-367 (2018). … of microbial single-cell sequencing. Nat Methods 14(11): 1045-1054 (2017). Schulz F., Yutin N., Ivanova N. N., …
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Complete genome sequence of the thermophilic, hydrogen-oxidizing Bacillus tusciae type strain (T2T) and reclassification in the new genus, Kyrpidia gen. nov. as Kyrpidia tusciae comb. nov. and emendation of the family Alicyclobacillaceae da Costa and
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Hiroshi Otani
… bacterial RiPP biosyntheses. J Ind Microbiol Biotechnol. 2023 Feb 17;50(1):kuad005.  Otani H, Udwary DW, Mouncey NJ. … pangenomic analysis of the genus Streptomyces. Sci Rep. 2022 Nov 7;12(1):18909. Otani H, Mouncey NJ. RIViT-seq … microbial natural products. Nat Rev Microbiol. 2021 Nov;19(11):683. Mouncey NJ, Otani H, Udwary D, Yoshikuni Y. New …
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Toward More Reproducible, Reusable Stable Isotope Probing Experiments
… for a SIP-focused workshop at the JGI in the fall of 2024. “ We wanted to get into the nitty gritty with the …
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