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The Power of One, Amplified
… that were missed within paired metagenome assembled genomes (MAGs), and that dominant populations varied with … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … Microscale Applications group . Cells were randomly sorted, whole genome amplified, then sequenced and assembled. Robert …
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Introducing New Members of the JGI User Executive Committee
… The JGI welcomes three new members to the JGI User Executive Committee (UEC) : Roland Hatzenpichler of … “you-wren”) of the University of Arizona! They join nine other JGI users already serving on the UEC – go here …
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JGI Pitches 2022 Visiting Faculty Program Collaborations
…   On November 3, 2021, the JGI and the Workforce Development & Education department of … Laboratory (Berkeley Lab) hosted a pitch event promoting fully-supported summer research collaborations through … collaborations were: Simon Roux and Matthew Kellom for the JGI Metagenome Program Ellen Dow and Elisha Wood-Charlson …
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UC Merced Interns Reflect on Their JGI Summer Projects
… past summer, 10 students from UC Merced worked closely with JGI scientists on research projects that contribute to the … develop presentation skills as well as build their network in the field of genomics and scientific research. The topics … about their work here in a series of videos produced by JGI Communications & Outreach intern Ashleigh Papp. The …
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JGI Workshop at 2025 Aquatic Sciences Meeting
… Details forthcoming at ASLO 2025 Aquatic Sciences Meeting …
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DOE JGI Metagenome Workflow
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Accelerating Metagenomics Discoveries with Deep Learning
… Berkeley National Laboratory (Berkeley Lab) and other institutions shared their works-in-progress with 86 … Metagenomic data, or DNA sequencing data gathered from whole samples rather than single cells or isolated strains, … the US Department of Energy (DOE) Joint Genome Institute (JGI), presented on generating vector representations of …
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Help from Citrus’ Bitter, Hardier Cousin
… The chromosome-scale genome sequence of trifoliate orange yields clues to disease-resistance that could prove fruitful for saving Citrus from greening disease. You’ve probably never … the US Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at …
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Community Science Program
… community at large with access to high-throughput sequencing, synthesis, and metabolomics at the JGI for projects of relevance to Department of Energy (DOE)  … call is for expansive projects that leverage a range of JGI capabilities, and also requires a Letter of Intent. The …
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Reductive amination cascades in cell‐free and resting whole cell formats for valorization of lignin deconstruction products
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Whole community shotgun metagenomes of two biological soil crust types from the Mojave Desert
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Engagement Webinar: Utilizing long-read sequencing for metagenomics and DNA modification detection
… This webinar focused on how the JGI employs single-molecule, long-read DNA sequences to aid … require input in the ~ 30 – 100ng range. Note that beyond quantity, input quality (i.e., presence of “intact” … weight DNA) is an important factor as well for PacBio metagenomes. Q: How many PacBio metagenomes can I submit?  How …
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