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John Vogel
Dr. Vogel joined JGI in 2014 to establish a plant functional genomics … Prior to this, he served as a Research Molecular Biologist at the USDA for 12 years where he was a driving force behind … et. al. 2017 Sequencing and functional validation of the JGI Brachypodium distachyon T-DNA collection. Plant Journal …
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Uncovering Novel Genomes from Earth’s Microbiomes
Large-scale comparative analysis leads to identification of biosynthetic gene … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … the samples we analyzed.” Emiley Eloe-Fadrosh, head of the  JGI Metagenome Program and senior author on the study …
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Natural Prodcast Episode 11: Marnix Medema
… to the Department of Energy Joint Genome Institute’s Natural Prodcast, a podcast about natural products and the … of question have you applied them? Dan Udwary: Well, at JGI we have the Atlas of Biosynthetic Clusters . And this is … into IMG’s data. IMG being Integrated Microbial Genomics at JGI, a large data set of bacterial genomes. And so yeah, we …
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MycoCosm, the JGI’s Fungal Genome Portal for Comparative Genomic and Multiomics Data Analyses
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EcoFAB 2025: Advancing Mechanistic Microbial Science Using Fabricated Ecosystems
Register here Book your stay at the conference venue This inaugural event will bring … and disciplines who are developing and applying laboratory ecosystems to help transition microbiome science from largely observational to reproducible mechanistic studies.  This …
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Len Pennacchio
DOE Joint Genome Institute and has focused on applying state-of-the-art molecular methods to address wide-ranging … … The Deputy of Genomic Technologies serves as the JGI’s primary point of contact for all High-Throughput Data … technologies and providing a vision for future technical JGI directions for DOE User science. … Complete Publications …
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Natural Prodcast Episode 19: Bill Fenical
… … DAN UDWARY: Hey, everyone. I’ve got a great episode for you here today. We got the opportunity to … things I want to make sure that we talk about. You have a JGI project going with us that we want to talk a little bit … So fortunately, the secondary metabolite component of the JGI, people are interested in this area. DAN UDWARY: I know …
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Igor Grigoriev
Institute in 2003, following his postdoctoral training at UC Berkeley and work in the pharmaceutical industry. He … genomes, from protists to plants. In 2009, he launched the JGI Fungal Genomics program which resulted in over 2500 fungal genomes in the JGI MycoCosm portal. In 2018, he launched scale-up of algal …
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Complete Genome of Serratia sp. Strain FGI 94, a Strain Associated with Leaf-Cutter Ant Fungus Gardens
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Complete Genome of Enterobacteriaceae Bacterium Strain FGI 57, a Strain Associated with Leaf-Cutter Ant Fungus Gardens
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What Happens To a Rainforest When You Dial Up Drought?
… on Earth, and soil microbes play a key role in pulling that carbon out of the atmosphere. This episode, researchers take a look at what happens to that storage when a rainforest hits a …
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A Revamped Amplification Method that Enables Nearly Complete Single-Cell Genomes
… is through a method called Multiple Displacement Amplification, and most genomes that were acquired through it were … The U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … their analysis goals. Offering this tool establishes the JGI as a leader in single-cell genomic amplification at a …
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