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Leo Baumgart
… embryo and root development." Plant Communications 6, no. 10 (2025). Kruse, Colin PS, Sara Calhoun, Bishoy Kamel, … DNA affinity purification sequencing (DAP-seq) to identify in vitro binding sites of potential Novosphingobium … in bacterial gene regulation." Nature methods 18, no. 12 (2021): 1499-1505. Hasty, Jeff, Leo Alexander Baumgart, Scott …
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Supporting Global Research into Actinomycetes
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The Expanding Universe of Methane Metabolisms in Archaea
… gas 20 times more potent than carbon dioxide. Billions of years ago, methane-producing archaea likely played a key … by the other study co-authors, and reconstructed from these 10 metagenome-assembled genomes (MAGs) representing new … with the first traces possibly at ~3.5 Gy (billion years),” Borrel and Gribaldo said in an email. “Therefore, …
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Tapping the treasure trove of atypical phages
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Licence to knockdown — the phage gene silencer
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The Earth BioGenome Project 2020: Starting the clock
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Tanja Woyke Elected to American Academy of Microbiology
… proteins, and virus diversity in this group expanded 10-fold, offering the opportunity to refine the phylogenetic …
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MycoCosm portal: gearing up for 1000 fungal genomes
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Plant Pan-Genomics Comes of Age
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DAP-seq Drives Robust Mapping of Gene Regulation
… bioenergy and bioengineering applications. “We worked with 10 species ranging from grasses to broccoli and trees like poplar, spanning about 150 million years of evolution,” said Leo Baumgart, first author on the … Advancing gene regulation mapping Previous methods to identify where transcription factors (TFs) — the proteins that …
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A Better Way to Find RNA Virus Needles in the Proverbial Database Haystacks
… may be akin to finding a single snowflake on a colored-in page of that book. Published online September 28, 2022, in … viruses is just the beginning. “I often say that just identifying a sequence as viral is not even half the story.” Neri … of efficient, automated approaches to analyze and classify sequence data at this scale is essential.”   …
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Meeting report: International soil virus conference 2024
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