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Transcriptional control of Clostridium autoethanogenum using CRISPRi
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Offerings & Capabilities
The central mission of the JGI’s Genomic Technologies department is   ensuring users have access to cutting-edge capabilities to help …
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Engagement Webinar: Harnessing JGI’s Metabolomics Capabilities
The JGI Engagement Webinar held November 5, 2020 (watch the  video below, captions are available) spotlighted the … available on a peer-reviewed competitive basis via its  User Programs . Q:  Are applicants outside of JGI eligible to apply for CSP?  I am at NIST. A: The JGI User Programs are designed to be available to academic, …
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Neha Varghese
Neha’s key role is to design, benchmark, and apply bioinformatics software to enable analysis … interpretation of genomic and metagenomic data for JGI’s user community. She also provides support for user science and projects through implementation of advanced …
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Data shopping in an open marketplace: Introducing the Ontogrator web application for marking up data using ontologies and browsing using facets
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Matt Blow
Dr. Blow joined the JGI in 2009, and currently heads the User Support Analysis group. He received … in bacteria. Since 2016, he has been the lead of the User Support Analysis group. The group performs custom …
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Gut Fungi: Unexpected Source of Novel Chemicals
Fungi from herbivore poop make surprisingly complex compounds — an energetically expensive feat thought … (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National … Sciences Laboratory (EMSL), a DOE Office of Science user facility at Pacific Northwest National Laboratory. The …
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Fungus Fuels Tree Growth
Researchers start pinning down how a fungal symbiont spurs growth … (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility, through its  Community Science Program in … and National Science Foundation (concept ID 10.13039/100000001; grant number DEB 1737898). …
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Gene Expression: From On-Off Switch to Dial
Fine-tuning metabolic gene expression helps identify variants in yeast genes. … systems, expanding the technologies available for other JGI users outside the realm of bioenergy optimization. Summary … (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National …
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Viruses Reprogram Cells into Different Virocells
Microbial cells infected by viruses undergo metabolic … in part by the  Facilities Integrating Collaborations for User Science (FICUS) collaborative science initiative … (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National …
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SpaRC: scalable sequence clustering using Apache Spark
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Protein structure determination using metagenome sequence data
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