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A metagenome-level analysis of a microbial community fermenting ultra-filtered milk permeate
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Jeremy Schmutz
… back to 1997, when he was working for the Stanford Human Genome Center, now the HudsonAlpha Institute for … 19. Following the completion of the Human Genome Project in 2003, he developed sequencing, assembly, and improvement … the JGI Plant Program, focusing on the organization of community driven science for JGI Plant Flagship Genomes and …
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Getting to the Bottom of Fungal Functions Across Earth’s Forests
… researchers have leveraged data from the 1000 Fungal Genomes project to form new connections between fungal … of these varied biomes; the forests share only about 20% of their fungal species. To make useful comparisons, the … Genomes that Paved the Way This project stems from a Community Science Program proposal that Martin submitted in …
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JGI Workshop at SIMB NP Meeting
… these untapped metabolic capabilities is often tedious and resource intensive. This is often due to, for example, tight … a given BGC in various hosts, availability of sequenced genomes, and computing resources needed to predict BGCs from available genome sequences. The DOE Joint Genome Institute (JGI), a …
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New Research Sheds Light on Diversity in the Deep Sea
… — influence the makeup and functioning of a given microbial community. Scientists with the U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility at … contributed metagenomic sequencing to the study as well as  genome analysis, providing authors a more complete picture …
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Fields of Breeders’ Dreams: A Team Effort Toward Targeted Crop Improvements
… from half of the United States. As  reported January 27, 2021 in  Nature , the team led by researchers at the … and the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User … sustainable alternative fuels. Common Gardens Are A Community Effort The common gardens began nearly a decade …
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A Grass Model to Help Improve Giant Miscanthus
… of polyploidy and perenniality. The Science A reference genome sequence and genomic toolkit for the perennial grass … Miscanthus sinensis has been published. Analysis of the genome sequence also provides insights into how the multiple … environments such as poor soils and drought. The reference genome for M. sinensis, and the associated genomic tools, …
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Peatland microbial community responses to plant functional group and drought are depth‐dependent
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Impacts of The Wetland Sedge Carex aquatilis on Microbial Community and Methane Metabolisms
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Long-read metagenomics of soil communities reveals phylum-specific secondary metabolite dynamics
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Microbial communities of the Laurentian Great Lakes reflect connectivity and local biogeochemistry
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High-resolution metagenomics targets specific functional types in complex microbial communities
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