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Across four forests, researchers have leveraged data from the 1000 Fungal Genomes project to form new … RNA to understand gene expression, and developed new tools to map that soil RNA to fungal genomes.  The U.S. … same route. “It was really amazing how the quality of the data improved thanks to that massive amount of new genomes,” …

Institute in Hanover, Germany, where he developed novel tools for large-scale in situ gene expression analysis in …

… and renewable chemicals, developing genome engineering tools for non-model organisms, modulating microbe-microbe …

… genome for M. sinensis, and the associated genomic tools, allows Miscanthus to both inform and benefit from … of the tetraploid M. sacchariflorus whole genome sequence data was funded by the BBSRC Core Strategic Programme in … sinensis genome … CABBI Sequences Miscanthus Genome … Datasets … From our partners …

In the last two episodes, we’ve covered the specialized software and supercomputers behind this project. But every …

… that giant assembly from Lake Mendota. In this episode: the software evolution that made metagenome assemblies like this …

Nikos Kyrpides, Natalia Ivanova and Simon Roux, along with data from a consortium that included Susannah Tringe and … and Roux also worked together on the development of a new software tool called geNomad that identifies and classifies …

The PhycoCosm data portal allows anyone to freely investigate the genes of … photosynthetic organisms. PhycoCosm is one of the largest data repositories of its kind, with an interactive browser … in algae. PhycoCosm joins other online data portals and tools created by JGI researchers, including the Integrated …

Felipe Valdez-Nuñez  The JGI is eager to work and share our tools with a widening circle of researchers. That’s why …

… advances in sequencing technologies and bioinformatic tools have helped decode the genomes of tens of thousands of … of microbial genomes directly from environmental sequence data, by piecing each genome together from large mixtures of … was identified from microbial and metagenome sequence data sets generated from a handful of hot springs, including …

The JGI is eager to work and share our tools with a widening circle of researchers. That’s why each …

GenTegra RNA Preparation Procedure … 1) Complete Sample Metadata form Sample metadata is collected via spreadsheet or directly via a web … See our Taxonomy Quick Guide. PM sends PI the sample metadata spreadsheet to fill out (or provides a link to complete …