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How to Submit Sequencing Samples
… 1) Complete Sample Metadata form Sample metadata is collected via spreadsheet or entered into a web … See our Taxonomy Quick Guide. PM sends PI the sample metadata spreadsheet to fill out (or provides a link to complete …  You will receive automated emails as raw sequence data becomes available, and as analysis is completed.   …
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A Grass Model to Help Improve Giant Miscanthus
… genome for M. sinensis, and the associated genomic tools, allows Miscanthus to both inform and benefit from … of the tetraploid M. sacchariflorus whole genome sequence data was funded by the BBSRC Core Strategic Programme in … Datasets …
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Natural Prodcast Episode 19: Bill Fenical
… for culturing, and then of course using modern phylogenetic tools measuring genes, the 16S gene, and comparing it with … this project too. I’m really looking forward to seeing the data when it finally gets off the sequencers. The pandemic …
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PhycoCosm Tutorial
… interactive collection of sequenced algal genomes, omics data and comparative analysis tools developed by the Joint Genome Institute (JGI), a US …
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Natural Prodcast Episode 7: Ben Shen
… so everybody, readers of the library, can come to our databases and look for the specific information they are … the genomics, with the bioinformatics and with the bigger data, another area I see a great potential will be machine … fungal strains, that will generate a massive amount of data that current technology has never encountered in the …
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Accelerating Metagenomics Discoveries with Deep Learning
… an online workshop to harness deep learning for metagenomic data.  Metagenomic data, or DNA sequencing data gathered from whole samples … Resources Division (CRD), in order to create more useful tools for the bioinformatics community. Other work presented …
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Supercomputing, MetaHipMer and the Mega Dataset of Lake Mendota
… trillion. Last year, the JGI surpassed three Petabases of data sequenced — that’s three-quadrillion base pairs of DNA sequence! To meet this “ data tsunami ,” as Kathy Yelick of the Computing Sciences … all of this information. The JGI aims to create pipelines, tools and other standardized data resources that the global …
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Natural Prodcast Episode 1: The Primer, Part 1
… so now here at the JGI, I work with all of the sequencing data that the JGI produces to try to find and identify … and to do research to get a better understanding of that data. ALISON: Awesome. So tell me why should I even care …
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Natural Prodcast Episode 2: The Primer, Part 2
… has been really crucial.  DAN: Yeah, yeah. The more data you generate, the more knowledge you can generate. So …
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MGM Workshop at Fisabio Summer School 2026
… fields who are interested in learning and sharing concepts, tools and research results in genomics, metagenomics and the … by Rekha Seshadri and Mateus Fiamenghi from the Microbiome Data Science group. …
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Natural Prodcast Episode 16: Marcy Balunas
… massive problems just as much as it brings about massive data into really interesting ways to look at our systems. … figuring out how to filter out noise from the metabolomics data. We’ve done a lot of work learning about how to use … strain to look at.  And then figuring out how to show this data and to do it in a way that makes sense. And I always …
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Single Cell Research Group
… high value to establish models and hypotheses, experimental data is critical to further test such hypotheses. In …
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