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A New Actinobacterial Chapter in the Genomic Encyclopedia of Bacteria and Archaea
… reactions. For this article alone, more than 600 genomes (dubbed “GEBA-Actino”) were sequenced from DSMZ type-strain deposits. All of these genome sequences and the tools to compare them are available on the JGI’s Integrated … gene loss shape the BGC repertoire in most genomes. The BGC data will also soon be contained within the JGI’s Secondary …
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Better Genome Editing for Bioenergy
… engineer organisms for bioenergy applications. Cas9 needs guide RNA to lead it to the correct sequence to snip — but … Joint Genome Institute (JGI), a DOE Office of Science User Facility. Y. lipolytica is a tantalizing microbial … of Energy Joint Genome Institute, a DOE Office of Science User Facility, is supported under Contract No.  …
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Dispatches From JGI Interns
… describe their deep dives into genomics, computational tools, and big data.  …
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Comparative transcriptomics as a guide to natural product discovery and biosynthetic gene cluster functionality
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Genome resources for three modern cotton lines guide future breeding efforts
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Natural Prodcast Episode 1: The Primer, Part 1
Genome Institute, or JGI. JGI is a DOE Office of Science User Facility located at Lawrence Berkeley National … so now here at the JGI, I work with all of the sequencing data that the JGI produces to try to find and identify … I kind of see it. DAN: So what we’ve got here is, I just grabbed a photo of a “biochemical pathways” chart. So if you …
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The complete genome sequence of the algal symbiont Dinoroseobacter shibae: a hitchhiker's guide to life in the sea
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Microbial colonization and persistence in deep fractured shales is guided by metabolic exchanges and viral predation
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MycoCosm Tutorial
Learn more about MycoCosm, a data portal with over 2,000 fungal genomes and multi-omics datasets, equipped with interactive web-based tools for comparative genomics and community annotation. …
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Single Cell Research Group
… high value to establish models and hypotheses, experimental data is critical to further test such hypotheses. In …
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Accelerating Metagenomics Discoveries with Deep Learning
… an online workshop to harness deep learning for metagenomic data.  Metagenomic data, or DNA sequencing data gathered … methods for nucleotide searches, such as  Mash and  BBsketch , whose lead developer is JGI software developer … Resources Division (CRD), in order to create more useful tools for the bioinformatics community. Other work presented …
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Natural Prodcast Episode 5: Brad Moore
… before you see toxin. And we have some preliminary data with other samples that we do see days to a week of a … of Energy Joint Genome Institute, a DOE Office of Science User Facility located at Lawrence Berkeley National Lab. You … air, email us at [email protected] .  And because we’re a User Facility, if you’re interested in partnering with us, …
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