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GenomeOcean Leverages AI to Decode Nature’s Secret Language
… genetic blueprint has long been a significant challenge in genomics. Enter GenomeOcean, a powerful generative model  … available data, GenomeOcean employs artificial intelligence for cutting-edge genomic research — and is capable of … while minimizing its demand for substantial operational resources.  ”The metagenomics data generated by the JGI are …
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Massie S. Ballon
… and Outreach Manager at the JGI. Through multi-platform stories and outreach efforts, the team aims to broaden awareness of and access to JGI public resources and the DOE mission, as well as help cultivate the next generation of genomic research users, partners, and collaborators.  Ms. …
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Eelgrass Proves to Be Much Younger Than We Thought
… most abundant plants in the ocean, originated in Japan before spreading around the globe. Now, scientists have shed … Nature Plants , was able to assess absolute time estimates for major colonization events. It was previously assumed, … at Lawrence Berkeley National Laboratory, provided sequence resources — including the eelgrass genome assembly that …
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An Integrated Dataset to Understand Ecosystem Interaction
… Research yields a comprehensive tree and soil dataset for understanding the dynamic relationship between poplar … managed through human intervention. By leveraging metagenomics, scientists were able to analyze the DNA of … the trees. The data set generated is 25 terabytes in size. Resources for genomic sequencing, analysis and …
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Making a Lichen Together
… For the first time, a team analyzes the transcriptomes of a … in the lichen lifestyle. The team’s results appear in  BMC Genomics . To explore the genomes, Armaleo and colleagues … and nitrogen exchange between the lichen partners. This genomic and transcriptomic analysis has opened the door for …
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Pinning Down a Piece of Photosynthesis
… and cyanobacteria create the air we breathe and the fuel for food webs as they turn carbon dioxide and water into … Synchrotron Radiation Light Source.  “DOE has some amazing resources and people — not just the instrumentation — but … what is now the  Community Science Program Functional Genomics proposal call, the JGI synthesized hundreds of  …
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Fields of Breeders’ Dreams: A Team Effort Toward Targeted Crop Improvements
… from half of the United States. As  reported January 27, 2021 in  Nature , the team led by researchers at the … sites. “This paper is a combination of really cutting-edge genomics and genetic analysis with large scale data … technologies have allowed us to build the necessary genome resources to directly test for genes involved in biomass …
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Crysten Blaby-Haas
… joint user capability between the JGI and Molecular Foundry for genome-encoded biomaterial discovery, design, and … working with Valérie de Crécy-Lagard on using comparative genomics to predict gene function in bacteria and leveraging … Services Honoree, 2022 Peter-Boyer Postdoctoral Award for Research Excellence, 2015 34th Annual Women’s …
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Alabama Agricultural & Mechanical University Internship Program
… Institute. AAMU students spent two months in Berkeley, California honing their scientific skills and collaborating with …
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Global Diversity of the Brachypodium Species Complex as a Resource for Genome-Wide Association Studies Demonstrated for Agronomic Traits in Response to Climate
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MIxS-HCR: a MIxS extension defining a minimal information standard for sequence data from environments pertaining to hydrocarbon resources
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JGI Plant Gene Atlas: an updateable transcriptome resource to improve functional gene descriptions across the plant kingdom
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