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Metatranscriptomic Sequencing of a Cyanobacterial Soil-Surface Consortium with and without a Diverse Underlying Soil Microbiome
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Metabolic model predictions enable targeted microbiome manipulation through precision prebiotics.
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TbasCO: trait-based comparative ‘omics identifies ecosystem-level and niche-differentiating adaptations of an engineered microbiome
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Drought shifts sorghum root metabolite and microbiome profiles and enriches for pipecolic acid
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Feature selection and causal analysis for microbiome studies in the presence of confounding using standardization
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JGI@25: From Life at the Extremes to Editing Genomes
For the past few years they have partnered with JGI’s Microbiome Data Science group led by Nikos Kyrpides , mining the Integrated Microbial Genomics & Microbiomes (IMG/M) system’s immense collection of publicly … in a Two-Protein-type V-C CRISPR System. Mol Cell. 2019 Feb 21;73(4):727-737.e3. doi: …
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Microsatellite discovery from BAC end sequences and genetic mapping to anchor the soybean physical and genetic maps
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Matt Blow
University in 2005, where he studied RNA editing and cancer genetics. Dr. Blow carried out postdoctoral work at LBNL, … regulation. Nature methods 18 (12), 1499-1505 Shulse et al. 2019. Engineered Root Bacteria Release Plant-Available …
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Cell by cell: population genetics in the wild
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Identification of mobile genetic elements with geNomad
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Plotting a Model for Virus-Host Warfare Deep Below Ground
… code for CRISPR systems, which help bacteria resist foreign genetic elements by incorporating short sequences from … are using Altiarchaea as a model system to study virus-host interactions. Approximately 150 archaeal viruses had been …
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Meanders as a scaling motif for understanding of floodplain soil microbiome and biogeochemical potential at the watershed scale
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