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Data Discovery Tool Helps Identify Microbial Roles within Metagenomes
… Metagenome Stability Diagram — a tool within the Integrated Microbial Genomes and Microbiomes (IMG/M) platform — has … could allow them to manipulate microbiomes to facilitate microbial solutions to challenging environmental problems, … from diverse environments and grouped those with similar microbial communities together. Those similarities, based on …
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iPHoP: A Matchmaker for Phages and their Hosts
… virus-host dynamics, computation helps fill in what cultivation can’t. The Science At first, viruses are merely … opens the possibility of using phages to engineer microbial communities. One day, these phages could boost …
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The genome of Polaromonas naphthalenivorans strain CJ2, isolated from coal tar‐contaminated sediment, reveals physiological and metabolic versatility and evolution through extensive horizontal gene transfer
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Complete Genome of Oil-Rich Alga Reveals Ideal Platform for Bioengineering
… to a mule, but that is still able to reproduce asexually through mitosis. The alga naturally produces high amounts of … The precise gene-targeting capability for Auxenochlorella means engineers can produce new bioproducts in a more … genome sequencing and assembly in Berkeley, in part, through the Laboratory Directed Research and Development …
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Ecophysiology of an uncultivated lineage of Aigarchaeota from an oxic, hot spring filamentous ‘streamer’ community
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Comparative single-cell genomics reveals potential ecological niches for the freshwater acI Actinobacteria lineage
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Metabolic potential of a single cell belonging to one of the most abundant lineages in freshwater bacterioplankton
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Genomic comparisons of a bacterial lineage that inhabits both marine and terrestrial deep subsurface systems
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Nitrogen and phosphorous acquisition strategies drive coexistence patterns among archaeal lineages in soil
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Viruses Reprogram Cells into Different Virocells
… Microbial cells infected by viruses undergo metabolic … microbes, the answer is no. They refer to the infected microbial cells as virocells, a change in name first … cycles that fuel the planet, and viruses control them through infection, but little is known about the impacts of …
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Calculating the Costs of Multiple Switchgrass Gene Copies
… oat, banana, potato, etc., switchgrass is polyploid. This means it contains more than two copies of the genome , which … variation available for selection to improve biofuel yield through a changing future. Switchgrass has multiple … times or does their broad distribution indicate multiple, independent origin events? Do the cytotypes react …
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Busting the Unbreakable Lignin
… use of those other two components, which requires getting through the lignin.  Researchers led by Michelle O’Malley’s … break down lignin will require further research, including confirming the genes and the enzymes those genes produce. If …
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