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JGI Earth Month: The Unusual Metabolism That Helps Plants Withstand Drought
In April 2020, we mark both the 50th celebration of Earth Day on April 22, and DNA Day on April 25. As … I recently caught up with Karolina at the Plant and Animal Genomes, or PAG conference, when in-person meetings were … i.e. in January. She talked about her  Community Science Project proposal with JGI, in which she’s studying a special …
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Work With the JGI! Tips for a Winning CSP Proposal
The JGI’s Community Science Program gives researchers access to all kinds of sequencing, … stage, anywhere in the world, for free. We accept new projects related to energy and the environment several times a year. A few proposal calls have …
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DOE JGI Interns Share Their Summer Experiences
… the field, work at the lab bench, and also do some computational analyses at their desks. As part of the DOE JGI’s … summer were: Rida Ali, who worked with T.B.K. Reddy on the Genomes OnLine Database; Sarah Fruchart , who worked with … worked with Zhong Wang’s group on an aspect of the same project assigned to Sharon and Cristhian; and, Lizhen Shi , …
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Marcel Huntemann
Marcel is in charge of several production pipelines (gene calling, functional annotation and methylomics) that run on microbial genomes and metagenomes. He also works on automating … exchange and assists with large scale computations on R&D projects. …
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New Research Finds Flagella in the Terrestrial Roots of Marine Bacteria
… have discovered flagella in an unexpected place: hot spring-dwelling bacteria from the phylum C hloroflexota . … other forms of  Chloroflexota that adapted to marine environments hundreds of millions of years ago.  The Impact … was done under Contract DE-AC52-07NA2734. Funding for this project was provided by the U.S. National Science Foundation …
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Emiley Eloe-Fadrosh
… ecology and metagenomics. Her current research focuses on leveraging thousands of metagenomic datasets from … genomic information from uncultivated microbes and viruses. Prior to joining the JGI, she was a Bioinformatics Program … Program; Genome Canada Large-Scale Applied Research Project Competition; NASA Exobiology; Graduate Women in …
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JGI on the 2020 Highly Cited Researchers List
Congratulations to the 2020 Highly Cited Researchers at the … Jeremy Schmutz Susannah Tringe Tanja Woyke Below are a few projects each of these researchers were involved in, … to the release of 52,515 publicly-available microbial draft genomes generated from environmental samples around the …
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Evolution of a Fungal Gene Expression Regulator
… analysis to date of the modified DNA base 5mC variations in fungi. The Science Changing an A, C, T or G in a genome sequence can lead to changes in protein structures and functions, but the DNA bases … 5mC is an important piece of how they regulate their genomes, but is not well understood in fungi. A team of …
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Exploring Polymorphisms Created by Transposable Elements
My project at the Joint Genome Institute (JGI) was to measure the polymorphisms that transposable elements (TEs) contributed to in the grass model species Brachypodium …
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Celebrating a Decade of Science through the JGI-UC Merced Genomics Internship Program
… 2023 marked a decade since the inception of the flagship internship program between the DOE Joint Genome Institute (JGI) and … partnership had become a “model” of sorts at the Lab. “This project represents part of our long term efforts to …
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Researching and Solving Real-World Problems with the 2023 JGI-UC Merced Interns
Program was brimming with excitement and determination as they came onsite. From data carpentry to science … and their JGI mentors are listed below, along with their project focus areas: Undergraduate Interns Andrew Lin and … and Exploring Novel BGC Detection Techniques on Fungal Genomes Video Transcript: Emerald Nash : What I’m working on …
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JGI announces 2023 CSP Functional Genomics awardees
…   Each year, the JGI accepts proposals for state-of-the-art functional genomics research from potential users who need help … Through our CSP Functional Genomics call , we look for projects that will leverage the JGI’s DNA synthesis and …
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