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Boosting Small Molecule Production in Super “Soup”
… still work in cell-free environments? (Spoiler: Yes.) Think of cells as tiny factories: within their walls they have … smoothly. As reported August 26, 2021, in Nature Communications , researchers led by Hal Alper at The University of Texas at Austin and Michael Jewett of …
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From Competition to Cooperation
… Tracking evolution of symbiotic lifestyles across multiple fungal lineages. The … symbiotic functions. Recently published in  Nature Communications , the work was led by a consortium of researchers … (INRAE), Hungary’s Biological Research Centre, Clark University, and the U.S. Department of Energy (DOE) Joint …
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Soil virus offers insight into maintaining microorganisms
… The work was enabled in part by a community data portal of the U.S. Department of Energy (DOE) Joint Genome … Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National Laboratory (Berkeley Lab). Using 5,000 … SSRL is a National User Facility operated by Stanford University on behalf of the U.S. Department of Energy, …
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JGI-Enabled Research Demonstrates the Existence of New Methane-Makers
… is not exclusively for Euryarchaeota. Atmospheric levels of methane, a potent greenhouse gas, regulate Earth’s … Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National Laboratory (Berkeley … Roland Hatzenpichler is an associate professor at Montana University and associate director of its Thermal Biology …
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New Research Sheds Light on Diversity in the Deep Sea
… get any sunlight, and yet they still support a unique array of microorganisms adapted to living in extreme conditions. … that live there.  Researchers from Portland State University and the University of Wisconsin-Madison collected … in hydrothermal vent communities, with possible applications in biogeochemical engineering,  biofuel production …
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Boosting Small Molecule Production in Super “Soup”
… Yeast strains engineered for the biochemical conversion of glucose to value-added products are limited in chemical … smoothly. As  reported August 26, 2021, in  Nature Communications , researchers led by Hal Alper at The University of Texas at Austin and Michael Jewett of …
Learn more
How Microbes Can Protect Plants in Drier Straits
… A mini-episode looking at the efforts of Pankaj Trivedi, whose New Investigator proposal was …
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Giant Bacteria Found in Guadeloupe Mangroves Challenge Traditional Concepts
… the slightly murky waters in the tube look like a scoop of stormwater, complete with leaves, debris, and even … Petri dish, the thin vermicelli-like threads floating delicately above the leaf debris are revealed to be single … a DOE Office of Science User Facility located at Lawrence Berkeley National Laboratory (Berkeley Lab) and the …
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Webinar: MycoCosm Tutorial
… JGI’s  MycoCosm data portal , an interactive collection of sequenced fungal genomes, omics data and comparative … are still working on finalizing the tree and related publication the tree is still in development and not available … for genes/proteins by their commonly used names in publications? e.g. erg-1 (instead of the Gene ID etc., which is …
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Notes on the Microbial Diversity of Puerto Nuevo’s Coastline
… Puerto Nuevo is a small town along the Baja California coastline in Mexico. While conducting early field … UC Merced graduate student Sabah Ul-Hasan and alumnus of the JGI-UC Merced Genomics Internship Program, first … at the Center for Scientific Research and Higher Education at Ensenada (CICESE) in her first microbial ecology …
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JGI@25: Studying Sorghum’s Survival Skills
… In honor of the JGI's 25th anniversary in 2022, we have revisited a … genome for Sorghum bicolor . Since then, 2,993 publications, 107 patent applications, and 53 patents have cited … for three years (2016-2018) in the field in Parlier, California at the UC Kearney Agricultural Research and …
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Benjamin Cole
… University of California, San Diego (PhD, 2011) Rensselaer Polytechnic … List of pubs available on NCBI … Implementation of the Index of Cell Identity as an R package … Education … Selected Publications … Software …
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