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Microbial Genomics & Metagenomics (MGM) Workshop
Registration has closed.  The U.S. Department of Energy (DOE) Joint … highly hands-on workshop is designed to familiarize users with the Integrated Microbial Genomes & Microbiomes (IMG/M) … workflows for computational analysis and interpretation of sequence data. IMG/M is a web-based platform that provides …
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The Case for Conservation
How sex chromosomes “older than dinosaurs” could help improve crop yields.  The Science The fire moss Ceratodon purpureus is a short plant with a complex genome . Now, high-quality reference genome …
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Simon Roux Named 2025 ASM Microbiome Data Prize Awardee
Congratulations to US Department of Energy (DOE) Joint Genome … for Microbiology (ASM). Roux leads the Viral Genomics group within the JGI Metagenome Program, and coordinates the development of the virus and plasmid workflows for the National Microbiome Data Collaborative.  …
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Katherine Louie
Dr. Louie joined the JGI in 2014 to develop the metabolomics program, and in 2019 became Platform Lead where she manages metabolomics production for community sequencing projects and heads R&D efforts … over 10k samples/year, Dr. Louie and her team work with other JGI scientists in development of new, advanced …
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Effects of Polar Light Cycle on Microbial Food Web
Populations of Antarctic lake microbial communities change with … over a 10-year period and sent to JGI for metagenomic sequencing. A study  recently published in  Microbiome shows …
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Natural Prodcast Episode 3: The Primer, Part 3
… … DAN: You’re listening to the US Department of Energy Joint … Prodcast,” a podcast about the science and scientists of secondary metabolism.  DAN: Hey there. This is Dan again, and … drug discovery train moving, drug companies started working with some techniques referred to as “combinatorial …
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JGI@25: Strengthening Soybean
In honor of the JGI's 25th anniversary in 2022, we have revisited a number of notable … to energy independence in the U.S. Not only does it pair with maize, the dominant source of bioethanol, in crop … first legume species with a published complete draft genome sequence. At the time, the vital global source of both …
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Genome Sequence of Kosmotoga olearia Strain TBF 19.5.1, a Thermophilic Bacterium with a Wide Growth Temperature Range, Isolated from the Troll B Oil Platform in the North Sea
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New Vision, New Mission, New Plan: The JGI’s Next Five Years
… strategic plan outlines how the JGI will advance the bioeconomy, leveraging partnerships to advance foundational … .) This plan aligns the DOE Office of Science user facility with broader national efforts to promote and stimulate a … improving connectivity across the DOE data ecosystem, building and harnessing partnerships, enhancing the JGI’s …
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Fields of Breeders’ Dreams: A Team Effort Toward Targeted Crop Improvements
… recognize that crop varieties grow best in certain regions. Most plant species have adapted to their local … genome using samples collected at these gardens. Building off this work, researchers at three DOE Bioenergy … the crop for additional end products. The genetic diversity within this set of plants, each with a fully-sequenced …
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High quality draft genome sequence of the slightly halophilic bacterium Halomonas zhanjiangensis type strain JSM 078169T (DSM 21076T) from a sea urchin in southern China
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Pinning Down a Piece of Photosynthesis
By studying the structure and function of a cyanobacterial protein, researchers have … pin down.  Photosynthesis appears to have a lot in common with a Rube Goldberg machine: surprising dependencies, …
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