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JGI@25: Roots of a Mutualist Relationship
In honor of the JGI's 25th anniversary in 2022, we have … a number of notable achievements that showcase our collaborations and capabilities to enable great science that … many sequenced through the JGI 1000 Fungal Genomes Project.       Francis Martin on the main impact of …
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A Better Way to Find RNA Virus Needles in the Proverbial Database Haystacks
Team develops a computational pipeline to sift and characterize RNA virus … viruses,” said Simon Roux , a JGI scientist and one of the project co-leads. “But same as DNA viruses, RNA viruses …
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High Five: Celebrating the JGI-UC Merced Genomics Internship Program
More than 20 UC Merced students have contributed to the research of 13 JGI scientists since the … shared their thoughts on the students’ efforts. Ben Cole, a project scientist in Visel’s Genomics of Plant-Microbial …
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Viruses Reprogram Cells into Different Virocells
But if the duck gets infected by a virus so that it no longer looks or quacks like one, is it still a duck? For a … microbes that capture and store carbon in the ocean could fix less carbon when infected. Little is known about … and Environmental Research in one proposed research project. For this project, RNA sequencing was done by the …
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Gut Fungi: Unexpected Source of Novel Chemicals
Fungi from herbivore poop make surprisingly complex compounds — an energetically expensive feat thought … and help them digest their last leafy meal. In their evolutionary history, these fungi branched off early from aerobic … clearly have unexpected chemical potential. … This research project was supported by a grant from Santa Barbara Cottage …
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Fungus Fuels Tree Growth
Researchers start pinning down how a fungal symbiont spurs growth of poplar, a potential biofuel feedstock.   … expression when the fungus is present. The Impact Black cottonwood, or poplar, ( Populus trichocarpa ) is the … 0002 01 to F. Martin), JGI Community sequencing program project (CSP570, DE-AC02-05CH11231), and National Science …
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Pinning Down a Piece of Photosynthesis
By studying the structure and function of a cyanobacterial protein, researchers have new … has some amazing resources and people — not just the instrumentation — but the experts we were able to work with on this project to ask questions about structure and function,” …
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JGI Earth Month: Wetlands Work in #TenHundredWords
April marks both the 50th celebration of Earth Day on April 22, and DNA Day on April 25. As … Graduate Student Research (SCGSR) program . Her research project, “Microbial Community Structure and Methane Production in California’s …
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Access to Rock Star Scientists
Merced Genomics Internship, graduate students Candace Cole, Mo Kaze, Akshay Paropkari, Vicente Ramirez and Rhondene Wint had summer 2018 internships in Walnut Creek. The … by passionate scientists working on interdisciplinary projects. I feel inspired to pursue a career in STEM. …
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Natural Prodcast Episode 17: Cassandra Quave
… curator there, with a broad range of experimental work on plants for drug discovery in antibiotics, anticancer, and … find me. And really it was my third grade science fair project where I first looked into a microscope and just fell … whether it’s for plants to make clothing, or musical instruments, or food, or medicine, which was really where my …
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From Berkeley to Binghamton: Tracking Strawberry Evolution
In the summer of 2015, Adam Session was a postdoc working at the DOE Joint Genome Institute … New York. He and Rokhsar have  recently published a Nature Communications paper that builds off their early … specific procedure.” The rapport they built during this project and others (including the dissertation that preceded …
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Virus-Microbe Interactions of Mud Island Mangroves
University of Texas at Austin, will defend his dissertation. Some of his research was conducted at the JGI through the DOE Office of Science … wetlands in south Texas,” he explained. “In terms of my project, I wanted to incorporate that CSP, but also look at …
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