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JGI Workshop at 2025 Aquatic Sciences Meeting
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Back in the Lab: the 2023 Summer Intern Experience
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Crysten Blaby-Haas
… Molecular Foundry, a nanoscale research and knowledge-based user facility at Berkeley Lab. She is spearheading the development of a joint user capability between the JGI and Molecular Foundry for … of Florida, working with Valérie de Crécy-Lagard on using comparative genomics to predict gene function in …
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Len Pennacchio
… Pennacchio joined the DOE Joint Genome Institute and has focused on applying state-of-the-art molecular methods to … at Stanford University where he uncovered the genetic cause of a rare form of human epilepsy and subsequently generated one of the first mouse models for this common neurological disorder. In 1999, …
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Interdisciplinary delegation from the University of Duisburg-Essen explores collaborative opportunities with Lawrence Berkeley National Laboratory
… UDE familiarized themselves with the research programs and user facilities at Berkeley Lab. Commenting on the visit, JGI Director Nigel Mouncey expressed enthusiasm about the potential of this collaboration stating, “We … head of the Microbial Genomics Program, is enthusiastic about new collaborative projects: “We are excited to …
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Dispatches From JGI Interns
… JGI mentors. In this episode, hear two interns from the 2021 cohort describe their deep dives into genomics, …
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JGI@25 RECAP: 2022 Annual Meeting features historical perspectives on JGI’s 25 years
… all that it has contributed, and what they’re excited about in JGI’s future. Find recordings and recaps of these … to be junk DNA, so there was quite a bit of resistance to use resources to sequence it,” Patrinos said. After many … of a genomic arms race as they recognized the private industry’s interest in simultaneously sequencing the human …
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JGI on the 2020 Highly Cited Researchers List
… Dan Rokhsar Simon Roux Asaf Salamov Jeremy Schmutz Susannah Tringe Tanja Woyke Below are a few projects each of these researchers were involved in, reported on over the last year: Kerrie Barry , Jane Grimwood … Chen ,  Natalia Ivanova ,  Nikos Kyrpides ,  Simon Roux , Susannah Tringe , and Tanja Woyke  were part of a “big data” …
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Computationally Classifying Fungal Lifestyles
… and feedstocks for biomass and biofuel production. Learning about the ecology and evolution of  Dothideomycetes could … (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National … the data provided. In this proof of concept test, the team reported that the algorithm was over 95% successful at …
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JGI@25: Following Fungi that Pry Apart Plant Polymers
… that will help solve energy and environmental challenges.   Usually, plants have the upper hand against any kind of … of years evolving tactics against potential threats. “Because plants can’t run away, they’ve evolved these really … complexes that work like assembly lines for efficiency.  In 2021, her team saw that four strains of anaerobic fungi …
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Phytozome: Tutorial Workshop from 2022 CROPS Conference @HudsonAlpha
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Adopt-A-Genome
… the literature. These students analyze the genomes, write reports, and publish first-author papers, making the data … (JGI) and Matt Escobar (California State San Marcos) about how the Adopt-A-Genome project got started. Plus, Kalyani Maitra (California State Fresno) and two …
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