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Picking Up Threads of Cotton Genomics
… out of the green pods in every direction. There are 100 million families around the world whose livelihoods … these things take not five or eight years, but sometimes 10 or 15 years, because the technology develops over time.” …
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A Cost-Efficient Way to Convert Yeast into a Cell Factory for Hydroxyapatite
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Novel heavy metal resistance gene clusters are present in the genome of Cupriavidus neocaledonicus STM 6070, a new species of Mimosa pudica microsymbiont isolated from heavy-metal-rich mining site soil
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Hiroshi Otani
… pangenomic analysis of the genus Streptomyces. Sci Rep. 2022 Nov 7;12(1):18909. Otani H, Mouncey NJ. RIViT-seq enables systematic … of regulons of transcriptional machineries. Nat Commun. 2022 Jun 17;13(1):3502. Udwary DW, Otani H, Mouncey NJ. New …
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GenomeOcean Leverages AI to Decode Nature’s Secret Language
… You’d go find the cash converter box, feed it a $1, $5 or $10 bill and receive a set amount of tokens, commensurate in … from large metagenome projects — ultimately assembling over 220 Tb of sequences and obtaining 700 Gb of assemblies. The …
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VEGA Symposium
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Dealing with Drought: Uncovering Sorghum’s Secrets
… For that reason, its genome was sequenced by the JGI in 2009 and it is considered to be a Flagship Plant. By … site and then collect and process the samples starting at 10am Pacific time. JGI researchers helped develop the … datasets. The results from the first year showed that 10,727 genes or 44% of expressed genes respond to drought …
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Complete genome sequence of the thermophilic, hydrogen-oxidizing Bacillus tusciae type strain (T2T) and reclassification in the new genus, Kyrpidia gen. nov. as Kyrpidia tusciae comb. nov. and emendation of the family Alicyclobacillaceae da Costa and
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Mapping the Earth’s Hidden Fungal Kingdom
… and yeasts, outnumber their ancient relatives by nearly 10 to one in sequenced collections. Yet the early-diverging … for the next generation of scientists. Initiatives like our 1000 Fungal Genomes Project established crucial phylogenetic … data for researchers worldwide. As the JGI scales toward 10,000 annotated genomes, this infrastructure advantage …
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Frequently Asked Questions: Project Management
… following sites: Microbes: IMG (citation: https://doi.org/10.1093/nar/gkaa939 ) Metagenomes and Single Cells: IMG/M   (citation: https://doi.org/10.1093/nar/gkaa939 Fungi: Mycocosm (citation: …
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Nigel Mouncey
… Society for Industrial Microbiology and Biotechnology in 2022-2023.   Commentary … with 824 Isolate Reference Genomes. Cell Genomics 2: 100213 Nayfach S et al. 2021. A genomic catalog of Earth’s microbiomes. Nat Biotechnol. 39:499-509 Hurley A et al. 2021. Tiny Earth: A Big Idea for STEM …
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A Collaboration to Improve Plant Genome Annotations Across Species
… Avinash: In the initial planning phase, there were about 10 groups that came together to standardize the experimental …
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