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Ben Bowen
… bioenergy and environmental objectives. … BS – University of Arkansas, Fayetteville, Chemical Engineering Ph. D. – … & Metabolic Biology … 2024 Berkeley Lab Recognition of Excellence Award 2016 R&D 100 Winner 2014 Berkeley Lab … with the unknown: metabolomics and metabolite atlases. Journal of the American Society for Mass Spectrometry, 21, …
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Adopt-A-Genome
In this episode, undergraduates adopt genomes that the JGI sequenced, but never published in the literature. These … available for future research. Hear from Rekha Seshadri (JGI) and Matt Escobar (California State San Marcos) about … and Mark Soghomonian share what it was like to take on one of these genomes.  …
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JGI-USCCN Strain Sequencing Opportunity
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Exploring Polymorphisms Created by Transposable Elements
My project at the Joint Genome Institute (JGI) was to measure the polymorphisms that transposable …
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Jinghua Jenny Huang
Jenny is working on the display and visualization of large amount isolate genomic and metagenomic data stored …
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At the Forefront of Terrestrial Virus Research
Matthew Sullivan. He shared a few thoughts on his summer at JGI through a program that provides graduate thesis research …
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Back in the Lab: the 2023 Summer Intern Experience
… in several years for students and researchers alike at the JGI. With the past few years upended by the pandemic, 2023 …
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Experimenting with EcoFABs for Student Labs - Jill Bouchard & Ying Wang
To set up flexible, repeatable experiments on plants and microbes, Trent Northen’s group at Berkeley Lab created a fabricated ecosystem – an EcoFAB. These small plastic growth chambers let researchers … to see EcoFABs in action in Jill Bouchard’s BIO 21 lab course. …
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JGIota: Looking Back at Sequencing for Soybeans
The soybean is a crop that could boost biofuels and fertilize fields. So in 2010, the JGI helped publish the original genome sequence for the … that work from researchers Gary Stacey (University of Missouri), Peter van Esse (The Sainsbury Laboratory) and …
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The Megadata of Lake Mendota - Part 2: Souped Up Computing
This series is the story of a giant metagenome assembly from Wisconsin’s Lake … — Summit and Frontier — that process terabytes of data with MetaHipMer2. And the National Energy Research … Perlmutter that works at large scale. But nearby the JGI, a cluster called Dori is also capable of running …
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IMG/VR
JGI's Simon Roux describes the structure and content of the IMG/VR v3 database (img.jgi.doe.gov/vr), the latest release of IMG database …
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