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… JGI and the Workforce Development & Education department of Lawrence Berkeley National Laboratory (Berkeley Lab) … faculty members may invite up to two student participants from the faculty member’s home academic institution, one of … were: Simon Roux and Matthew Kellom for the JGI Metagenome Program Ellen Dow and Elisha Wood-Charlson for the …

… JGI User Executive Committee (UEC) : Roland Hatzenpichler of Montana State University, Teresa Pawlowska of Cornell … for wanting to serve on the UEC. Hatzenpichler, who studies sediment-dwelling archaea, expressed his interest in giving … to JGI.” The UEC represents the JGI user community and is responsible for providing input and advice on JGI policies and …

… combines custom flow cytometric analysis, cell sorting, genome amplification, PCR screening, and 16S sequencing. She … novel flow cytometry protocols for targeted recovery of specific microbes. …

… UC Merced students and their JGI mentors toasted to the end of a nine-week virtual internship. The celebration was … began in 2014, pairs undergraduate and graduate students from UC Merced with at least one JGI mentor. Together, they work through a specific project that aligns with each intern’s interests or …

… Dr. Malmstrom is a Staff Scientist and leader of the Microscale Applications group. Before joining the JGI … genomics pipeline that provides JGI users access to the genomes of uncultured microbes.  His group also handles the … pipeline  that reveals in situ functional activities of specific microbial groups within complex communities.  The …

… the JGI in 2017 to lead viral genomics research as part of the Metagenome Program. His responsibilities include the development of novel … Neri et al., 2023. Expansion of the global RNA virome reveals diverse clades of … learning framework to maximize host prediction for metagenome-derived viruses of archaea and bacteria. PLoS Biology …

… serving on the UEC – go here to view the full roster of members. Each of the researchers had their own reasons … other scientific organizations. Fungal biologist Stajich from UC Riverside sees the JGI’s open application process … The UEC represents the JGI user community and is responsible for providing input and advice on JGI policies and …

… My project at the Joint Genome Institute (JGI) was to measure the polymorphisms that transposable elements (TEs) contributed to in the grass model species Brachypodium hybridum . …

… food, medicine, and bioenergy crops. But most available genomes are from narrow swaths of the plant tree of life. One project aims to change that. …

… JGI's Simon Roux describes the structure and content of the IMG/VR v3 database (img.jgi.doe.gov/vr), the latest release of IMG database dedicated to viral genomes assembled from metagenomes. He also demonstrates briefly how to …

… A quick snippet on Antonio Camargo and Simon Roux, a few of the JGI researchers behind software that finds plasmids and viruses within microbial genomes. As mobile genetic elements like viruses spread their DNA, they can affect how microbes cycle …