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JGI Interns at UC Merced Earn CAMP Merit Awards
… from UC Merced recently had summer internships in Walnut Creek. These interns included Cristhian Gutierrez Huerta and Bryan Rangel Alvarez, both California … technology, engineering and math (STEM) fields. At the 2016 CAMP Statewide Undergraduate Research Symposium , held …
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Bacteria and Fungi Divvy Up the Work in Forest Floor
… and fungi have genes that can break down plant fibers. But are they both actually doing the job? By analyzing the … unlike bacteria, they often carry interrupting sequences, called introns. Introns are like having extra words squished … reference fungal genome sequences assembled as part of its 1000 Fungal Genomes Project . To map microbial activity, …
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Ben Bowen
… Dr. Bowen’s work focuses on developing high-performance computing workflows and integrating mathematics and chemistry … 2024 Berkeley Lab Recognition of Excellence Award 2016 R&D 100 Winner 2014 Berkeley Lab Director’s Award for … Analysis of metabolomics datasets with high-performance computing and metabolite atlases. Metabolites, 5(3), 431–442. …
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SPRUCE-ing Up Science
… first students to participate in the DOE Joint Genome Institute (JGI)-UC Merced internship program, Lawrence is now a … When Lawrence embarked on his PhD program at UC Merced in 2013, this field was just beginning to develop and expand into … the program . “There was a lot of freedom to explore,” he recalled. His project involved developing an algorithm and …
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Accelerating Metagenomics Discoveries with Deep Learning
… Berkeley National Laboratory (Berkeley Lab) and other institutions shared their works-in-progress with 86 participants … how researchers are utilizing deep learning to automatically generate insights from metagenomic data. In deep … is part of the JGI Genome R&D Group and is one of more than 100 scientists and systems engineers involved in …
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A Step Toward Controlling Soybean Rust
… much as 90 percent. As part of the DOE Joint Genome Institute’s  2016 Community Science Program portfolio , Sebastien Duplessis of the French National Institute for Agricultural Research (INRA)  proposed sequencing a … Berkeley National Laboratory, is committed to advancing genomics in support of DOE missions related to clean energy …
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Anuvia taps JGI for expertise to pinpoint products from beneficial soil microbes
… for a steadily growing worldwide population. Anuvia Plant Nutrients , a small Florida business producing bio-based plant nutrition products that target soil enrichment, is partnering … with the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at …
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JGI Part of Berkeley Lab Team Awarded Best Use of HPC in Life Sciences
… the full announcement “ Berkeley Lab Receives Multiple 2021 HPCwire Awards ” on the Berkeley Lab Computing Sciences site. Lawrence Berkeley National Laboratory … (Berkeley Lab), the National Energy Research Scientific Computing Center (NERSC), the DOE Joint Genome Institute (JGI), …
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Styling for Safety: PPE, It’s the JGI Way
… and remind our colleagues to do the same. Check out our JGI trendsetters below to see examples of appropriate … Berkeley National Laboratory, is committed to advancing genomics in support of DOE missions related to clean energy … that enable systems-based scientific approaches to these challenges.  DOE’s Office of Science is the largest supporter …
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New Research Sheds Light on Diversity in the Deep Sea
… well as the way in which those microorganisms break down nutrients, grow and repair themselves or eliminate waste. The … these vents survive in very hot, high-pressure and chemically-rich ecosystems. This means they hold clues for … function in such extreme conditions. They identified 511 new or recently discovered genera of bacteria and …
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Cataloging the Microbes that Manage the Health of River Systems
… and their health is heavily reliant on the energy and nutrient flows that the microbes in these bodies of water … or snow drain into such bodies of water before heading out to bays and oceans. While river microbes are critical to … the microbiology of watershed systems, they utilized over 160 river water samples collected through WHONDRS, a …
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