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Metagenomes from Arctic Soil Microbial Communities from the Barrow Environmental Observatory, Utqiaġvik, AK, USA
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Toward More Reproducible, Reusable Stable Isotope Probing Experiments
These analyses provide granular insight into microbial functions, traits and competition, illuminating the inner … a  Minimum Information for any Stable Isotope Probing Sequence (MISIP) . They differentiate between required … easier to compare?” said Malmstrom, who worked with JGI Metagenome Program head Emiley Eloe-Fadrosh to host …
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Pinning Down a Piece of Photosynthesis
By studying the structure and function of a cyanobacterial protein, researchers have new insights … of that machine — photosynthesizers’ DNA and RNA. These sequences provide a list of machine parts, and an idea of …
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2024 Progress Report
… 39,870 projects in FY24 We generated 871 Terabases of sequence We synthesized 9.7 Megabases of DNA We processed … our work on four strategic themes: Nutrient Cycling, Functional Diversity, Data and Connectivity and Stewarding … algorithms to identify billions of protein sequences in metagenomes.  We continue to engage with our user community …
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Meeting Code of Conduct
All participants and staff of the JGI events are required to adhere to the following Code of Conduct. Event organizers will enforce this Code … policy. Our aim in hosting an event is to build a stronger community. Our goal is to create an environment where …
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Rex Malmstrom
Dr. Malmstrom is a Staff Scientist and leader of the Microscale Applications group. Before joining the JGI … and carbon consumption of SAR11 bacteria, the most abundant bacterial group in the ocean. Later during his postdoctoral … Probing (SIP) Metagenomics pipeline  that reveals in situ functional activities of specific microbial groups within …
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The Power of One, Amplified
A preview of how large-scale single cell genomics complements … mobile genetic elements that were missed within paired metagenome assembled genomes (MAGs), and that dominant … snippets of microbial genomes directly from environmental sequence data, by piecing each genome together from large …
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Zhong Wang
… and enabling data-driven science. This is a group of computational biologists, bioinformaticians, computer … analyses, next-generation transcriptome de novo assembly, metagenome and metatranscriptome assembly, Hadoop based on sequence analysis framework, etc. For example, this group …
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Insight into the Bacterial Endophytic Communities of Peach Cultivars Related to Crown Gall Disease Resistance.
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Differences in crop bacterial community structure between hoatzins from different geographical locations
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Substrate perturbation alters the glycoside hydrolase activities and community composition of switchgrass‐adapted bacterial consortia
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Root-associated bacterial communities and root metabolite composition are linked to nitrogen use efficiency in sorghum
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