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High intraspecific genome diversity in the model arbuscular mycorrhizal symbiont Rhizophagus irregularis
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Exploiting proteomic data for genome annotation and gene model validation in Aspergillus niger
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FunGAP: Fungal Genome Annotation Pipeline using evidence-based gene model evaluation.
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The reference genome and abiotic stress responses of the model perennial grass Brachypodium sylvaticum
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Igor Grigoriev
… National Laboratory, and an Adjunct Professor of Plant and Microbial Biology at University of California, Berkeley. He … protists to plants. In 2009, he launched the JGI Fungal Genomics program which resulted in over 2500 fungal genomes … of researchers in genome projects and organized numerous genomics workshops. …
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Network Modeling of Complex Data Sets
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Brachypodium as an emerging model for cereal–pathogen interactions
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Atomic-Level Models of the Bacterial Carboxysome Shell
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DAP-seq Drives Robust Mapping of Gene Regulation
… with smaller genomes, such as bacteria and certain fungi. Scaling the technology’s availability to users is a … More specifically, it’s enabled several scientific discoveries that are key to understanding how to engineer … design and engineer organisms tailored for bioproducts and ecosystem resilience.  Aligned with DOE Biological and …
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Calculating the Costs of Multiple Switchgrass Gene Copies
… of genomic, quantitative genetic, landscape, and niche modeling approaches, we contrasted the diversity of 4X and … (8X)-specialist (4X) tradeoff. Furthermore, niche modeling suggests niche evolution between 4X and 8X linked …
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Assembly of 500,000 inter-specific catfish expressed sequence tags and large scale gene-associated marker development for whole genome association studies
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Discovery of a novel filamentous prophage in the genome of the Mimosa pudica microsymbiont Cupriavidus taiwanensis STM 6018
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