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JGI@25: Strengthening Soybean
… and oil was also the largest plant project completed by the JGI. It has since been cited more than 5,400 times, … Sainsbury Institute, by annotating not just one but three genomes for P. pachyrhizi , which are available on MycoCosm … Institute, who works extensively on ASR. “Having the genomes of a crop like soybean ensures that what we bring to …
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Help from Citrus’ Bitter, Hardier Cousin
… secrets. This work builds upon JGI-supported research led by Gmitter and JGI’s Daniel Rokhsar, published over the last …
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A call for standardized classification of metagenome projects
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A Grass Model to Help Improve Giant Miscanthus
… into how the multiple chromosomes of Miscanthus arose by ancient hybridization (polyploidy) and insights into the … Understanding the evolution of polyploidy, and how genomes respond to extra chromosome and gene copies, will … Miscanthus breeding programs. The team also sequenced genomes of numerous wild Miscanthus lineages to better …
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Here, There and Everywhere: Large and Giant Viruses Abound Globally
… and genome size from small, to large and even giant. The genomes of giant viruses are on the order of 100 times the … recent study  published in the journal  Nature , a team led by researchers at the U.S. Department of Energy (DOE) Joint … datasets becoming available but also complementary single-cell sorting and sequencing of viruses together with their …
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Len Pennacchio
… in human and mouse triglyceride metabolism. He is funded by DOE and through continued competitive grant support from … Data Generation Platforms (Sequencing, Single Cell, DNA Synthesis, and Metabolomics) as well as Research & …
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Engagement Webinar: Harnessing JGI’s Metabolomics Capabilities
… directly measure environmental or biological samples (like cell media or lake water) without doing a metabolite … resources. Q:  Where can I get information for funding by JGI? A: The JGI is not a funding organization. Rather, it … data from a whole microbial community, without having cell counts or biovolume? A: We typically use a measure of …
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Marchantia Pangenome Highlights Adaptive Nature of Plant Lineages
The team found that some of the adaptation strategies used by liverwort are also seen in flowering plants, or … into genes critical for roles including plant growth and cell wall development.  M. polymorpha is also among one of … 35 major evolutionary plant lineages in the  Open Green Genomes Initiative , a project supported by the U.S. …
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Matt Blow
… to study genome regulation in human and other vertebrate genomes. When he joined the JGI, he worked as a project … epigenome and other functional genomics datasets generated by JGI user science projects. … BS in Biochemistry and … PTA: Near Complete Genomes from Single Bacterial Cells bioRxiv , 2024.01. 30.577819 2. Dicenzo et al. …
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JGI User Executive Committee Expands
… decomposition. She’s also participated in the 1000 Fungal Genomes Project and has an interest in cross-disciplinary … On the UEC she intends to represent the user community by providing input on JGI policies and capabilities that … Her research focus is genetically engineering the plant cell wall to address dairy sustainability challenges. She’s …
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Designer DNA: JGI Helps Users Blaze New Biosynthetic Pathways
… issue of Synthetic Biology celebrates research enabled by the JGI DNA Synthesis Science Program. Fashioning DNA outside a cell is key to interrogating what genes do, how they work, … is famous for its work sequencing human and environmental genomes. But we now have these DNA synthesis capabilities …
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Jane Grimwood Named HudsonAlpha Genomics Chair
… was a group lead at Stanford Human Genome Center directed by Richard Myers, and among the Center staff that moved to … she has continued to contribute across JGI plant genomes. She has appeared on the annual Highly Cited … the first time. A 2020 Nature Genetics paper describing the genomes of the five major cotton lineages. Grimwood was also …
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