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Gut Fungi: Unexpected Source of Novel Chemicals
The Science Anaerobic fungi, which die in the presence of oxygen, dwell in herbivore guts and help them digest their last leafy meal. In their evolutionary history, these fungi … Science User Facility located at Lawrence Berkeley National Laboratory. More recently, O’Malley’s team has begun to …
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Sequencing and functional validation of the JGI Brachypodium distachyon T‐DNA collection
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Taking Stock of the Known and Unknown Microbial Space
Metagenomic datasets could help map out microbial diversity hotspots Over … in sequencing technologies have led to an abundance of microbial genomes becoming available to the global research community.  Published January …
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How Filamentous Fungi Sense Food
… . The Science A team led by researchers at the University of California, Berkeley used a multi-omics approach to … for filamentous fungi, all of which contain a wide array of plant cell-wall degrading enzymes (PCWDEs) that allow … sources, these fungi detect which complex chains are available; this information triggers pathways to determine which …
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Toward More Reproducible, Reusable Stable Isotope Probing Experiments
… communities than ever before — especially with the prospect of meta-analyses boosted by AI and Machine Learning — JGI researchers and collaborators work to create FAIR datasets to maximize returns on these advances. Over the last two decades, Stable Isotope Probing (SIP) has opened …
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Doubling Down on Known Protein Families
… online Oct. 11, 2023 in  Nature highlights the vast array of functional diversity of microbes through a novel approach … Science User Facility located at Lawrence Berkeley National Laboratory (Berkeley Lab), and collaborators across multiple …
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Shattering Expectations: Novel Seed Dispersal Gene Found in Green Millet
Survey of Setaria's natural diversity reveals seed dispersal in wild populations … to collect small weedy plants and bring them back to the lab. The weedy grass was green millet (Setaria viridis), a …
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2025 NeLLi Symposium
Registration and Agenda Coming Soon!  Hosted by the DOE Joint Genome Institute, the University of Nevada, Las Vegas, and the Desert Research Institute, the … 48″ wide or less to ensure 2 posters fitting on the boards. JGI posters are typically printed in the ARCH E size which …
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An Enzyme Family that Helped Shape Nitrogen Metabolism on Our Planet
Researchers looked across many organisms to see that aminotransferase enzymes have evolved mix-and-match … characteristics — creating many different ways of processing nitrogen. To boost crops more efficiently in … and Systems Biology Division of Lawrence Berkeley National Laboratory (Berkeley Lab). He completed this work with …
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JGIota: The Algae Nicknamed ‘Chlamy’
… a tiny, single-celled alga – Chlamydomonas reinhardtii – that’s managed to have a big impact. UC Berkeley plant … in the Environmental Genomics & Systems Biology Division of the Berkeley Lab Biosciences Area.] …
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Microbial Metagenomes Across a Complete Phytoplankton Bloom Cycle: High-Resolution Sampling Every 4 Hours Over 22 Days
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Scaling Up Existing Skill Sets
Over the course of the summer, the JGI-UC Merced Genomics Internship paired … UC Merced students with seven JGI researchers for bioinformatics internship opportunities in fields ranging from … me to a new career path of being a researcher in a national laboratory. In the future, I plan to pursue this path and …
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