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… Genomes from uncultivated bacteria offers clues to ancestral … members of the same clade as Cyanobacteria, applied strategies other than photosynthesis to gain and harness … teams joined forces and data sets to describe bacterial genomes for related (“sibling”) lineages Margulisbacteria …
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A New Actinobacterial Chapter in the Genomic Encyclopedia of Bacteria and Archaea
… collaborated with the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User … type-strain deposits. All of these genome sequences and the tools to compare them are available on the JGI’s Integrated … resource, but also yielding and supporting many high-impact publications ,” emphasized Markus Göker, who managed the …
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Gill bacteria enable a novel digestive strategy in a wood-feeding mollusk
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A standardized quantitative analysis strategy for stable isotope probing metagenomics
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Strategies for community-sourced biocuration in bioinformatics: a case study on MIBiG 4.0
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From Intern to Published Scientist: The Journey of a JGI-UC Merced Intern
… determination. Rhondene Wint, an alumna of the DOE Joint Genome Institute (JGI)-UC Merced internship program and … current PhD student, reached this milestone with a recent publication in Molecular Biology and Evolution . “It’s my … predictor of gene expression levels using machine learning tools. “This was very exciting to see how Rhondene not only …
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New and Improved: Eucalyptus Reference is Now Accessible
… An improved genome assembly to support targeted tree breeding for the …   The Science Researchers report a new reference genome for eucalyptus in the July edition of the journal G3 … having genomic resources to develop molecular breeding tools has been critical. The new improved genome assembly …
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Ancient Algae Reveal Secrets of Plant Evolution
… them to adapt to life on land. Learning that these genetic tools existed in close algal relatives  to terrestrial … agriculture and clean energy. These evolutionary strategies that helped plants thrive under challenging … Program of the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User …
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Uncovering Novel Genomes from Earth’s Microbiomes
… methods in the past decade, researchers have uncovered genomes for just a small fraction of Earth’s microbial … cannot be cultivated under laboratory conditions, their genomes can’t be sequenced using traditional approaches. … fields. A public repository of 52,515 microbial draft genomes generated from environmental samples around the …
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Picking Up Threads of Cotton Genomics
… Analysis reveals cotton genome stability across global lineages . Come harvest time, … darwinii are the others. All of these cotton lineages have genomes approximately 2.3 billion bases or Gigabases (Gb) in … Science “The results described in this  Nature Genetics publication will facilitate deeper understanding of cotton …
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JGI@25: Using Team Science to Build Communities Around Data
… (Graphic: Neil Byers) The JGI launched the 1000 Fungal Genomes (1KFG) Project through a 2012 Community Science … State University led the effort to sequence 1000 fungal genomes to create two reference genomes for all fungi … genomes that are both large and complex. The first publication of a genome generated by the OGG initiative — …
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Strategies for Enhancing the Effectiveness of Metagenomic-based Enzyme Discovery in Lignocellulolytic Microbial Communities
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