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DOE JGI Interns Share Their Summer Experiences
… This summer, the DOE JGI hosted 10 interns who came from a wide range of backgrounds. Many of them spent the summer crunching … summer were: Rida Ali, who worked with T.B.K. Reddy on the Genomes OnLine Database; Sarah Fruchart , who worked with …
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Meeting Report from the Genomic Standards Consortium (GSC) Workshop 8
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Meeting Report from the Genomic Standards Consortium (GSC) Workshops 6 and 7
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Foreword to the Special Issue on the Fifth Genomic Standards Consortium Workshop
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Plant Metabolic Network 15: A resource of genome‐wide metabolism databases for 126 plants and algae
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Accelerating Metagenomics Discoveries with Deep Learning
… Berkeley National Laboratory (Berkeley Lab) and other institutions shared their works-in-progress with 86 … data, or DNA sequencing data gathered from whole samples rather than single cells or isolated strains, is … insights from metagenomic data. In deep learning, a branch of machine learning, data is passed through algorithms …
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Soil virus offers insight into maintaining microorganisms
… The work was enabled in part by a community data portal of the U.S. Department of Energy (DOE) Joint Genome … (Berkeley Lab). Using 5,000 images of crystalized samples cloned and synthesized by the JGI, scientists have … retrieved using the  JGI’s Integrated Microbial Genomes & Microbiomes (IMG/M) data portal. The IMG suite is a …
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Divergent Genomic Adaptations in the Microbiomes of Arctic Subzero Sea-Ice and Cryopeg Brines
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A unified catalog of 204,938 reference genomes from the human gut microbiome
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The “Most Wanted” Taxa from the Human Microbiome for Whole Genome Sequencing
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Metagenome-Assembled Genomes from a Microbiome Converting Xylose to Medium-Chain Carboxylic Acids
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New insights from uncultivated genomes of the global human gut microbiome
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