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From Intern to Published Scientist: The Journey of a JGI-UC Merced Intern
… For many scientists, the culmination of their work into a written report that is published in a … current PhD student, reached this milestone with a recent publication in Molecular Biology and Evolution . “It’s my … embraced the research question and applied it to such a large data set, but also went all the way through to convert …
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Spray‐induced gene silencing to identify powdery mildew gene targets and processes for powdery mildew control
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Data Discovery Tool Helps Identify Microbial Roles within Metagenomes
… Metagenome Stability Diagram — a tool within the Integrated Microbial Genomes and Microbiomes (IMG/M) platform — has … and researchers more about the patterns and functions of environmental microbes. Researchers can use the tool to … specific to the environment.  Machine learning was also a large part of the creation of the tool. The team used two …
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Enriching public descriptions of marine phages using the Genomic Standards Consortium MIGS standard
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JGI Contributes Nine to 2022 Highly Cited Researchers List
… influence in their chosen field or fields through the publication of multiple highly cited papers during the last decade” by … C-fern is typical of most ferns in many ways, including its large genome with numerous chromosomes. This recent study, … to these challenges.  DOE’s Office of Science is the largest supporter of basic research in the physical sciences …
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Engagement Webinar: Utilizing long-read sequencing for metagenomics and DNA modification detection
… to aid with genome assembly and transcriptome analysis of microbial, fungal, and plant research projects.  More … weight DNA) is an important factor as well for PacBio metagenomes. Q: How many PacBio metagenomes can I submit?  How … to these challenges.  DOE’s Office of Science is the largest supporter of basic research in the physical sciences …
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Nikos Kyrpides
… 2004 to lead the Genome Biology Program and the development of the comparative analysis platforms for microbial genomes … Science. His group is developing novel methods for enabling large-scale comparative analysis, as well as mining and … BA in Biology, Aristotle University of Thessaloniki, Greece PhD in Molecular Biology and …
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QTL × environment interactions underlie adaptive divergence in switchgrass across a large latitudinal gradient
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Getting to the Bottom of Fungal Functions Across Earth’s Forests
… researchers have leveraged data from the 1000 Fungal Genomes project to form new connections between fungal … registers the sound — one thing is for sure: there are lots of fungi around. Within a forest’s soil, hundreds of species … for mapping these RNA reads. “Currently, this is the largest JGI-sequenced fungal metatranscriptome yet,” said …
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Description of Candidatus Mesopelagibacter carboxydoxydans and Candidatus Anoxipelagibacter denitrificans: Nitrate-reducing SAR11 genera that dominate mesopelagic and anoxic marine zones
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Multitrait genome‐wide association analysis of Populus trichocarpa identifies key polymorphisms controlling morphological and physiological traits
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Two deeply conserved non-coding sequences control PLETHORA1/2 expression and coordinate embryo and root development
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