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… The JGI’s Metabolomics Program works to uncover the roles of small molecules in biological systems, linking them with genomic data to enhance our understanding … The Metabolomics Program is focused on understanding the critical roles of metabolites in living systems, …

… Journal publication caps JGI pilot project with fledgling Florida high school scientists. The Florida Everglades … JGI researchers walked students through the processes of DNA sequencing, metagenome assembly, and even an … The U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility …

… Collaboratory encourages user engagement. The Science In addition to the core set of "primary … more than 13 million BGCs in the catalog at the time of publication, it is the largest repository of BGC sequence … public repository of BGC sequences that come pre-annotated using multiple commonly used sequence analysis tools is a …

… Trained on environmental data, a new JGI tool more accurately … research community able to not just analyze but also create DNA sequences mimicking an array of microbial life. By … LLMs aren’t just for understanding the human language and using it to communicate with machines. It has been applied …

… The JGI is leveraging its current partnerships to offer new capabilities and … different organizations is discoverable and accessible. Linking the resources of powerful institutions like the JGI, … (ESNet), the JGI has unique access to both expertise and infrastructure to facilitate these efforts. Particular areas …

… Tracing gene regulatory networks in the model fungus  … Program through a proposal akin to the Encyclopedia of DNA Elements (ENCODE) project, which is aimed at determining … method for identifying protein binding sites in DNA by DNA Affinity Purification, developed and optimized …

… forms of MGEs are viruses and plasmids. They can be found in virtually all of Earth’s ecosystems. A software tool  … currently has more than 700,000 plasmids from genomes, metagenomes and metatranscriptomes. To lower barriers to accessing and using geNomad, the JGI partnered with the NMDC to integrate …

… diversity hotspots Over the past few decades, advancements in sequencing technologies have led to an abundance of microbial genomes becoming available to the … scores representing potential genomes, and nearly 44,000 metagenomes. All of the data are publicly available in …