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Proteogenomic analyses indicate bacterial methylotrophy and archaeal heterotrophy are prevalent below the grass root zone

In-depth Spatiotemporal Characterization of Planktonic Archaeal and Bacterial Communities in North and South San Francisco Bay

MArVD2: a machine learning enhanced tool to discriminate between archaeal and bacterial viruses in viral datasets

Global Archaeal Diversity Revealed Through Massive Data Integration: Uncovering Just Tip of Iceberg

A collection of archaeal 16S rRNA Clone-FISH cultures for probe validation in fluorescence in situ hybridization experiments

… the ability to discover syntenic orthologs, generate publication quality graphics and explore pangenome views of …

Distinct Microbial Assemblage Structure and Archaeal Diversity in Sediments of Arctic Thermokarst Lakes Differing in Methane Sources

Applying Viral Genomics Expertise to Understanding the Human Virome

… maximize host prediction for metagenome-derived viruses of archaea and bacteria ( PLoS Biol , 2023). These tools have …

JGI Scientists Pen Genome Watch Articles

… Program lead, shone a spotlight on ammonia oxidizing archaea and what we’re learning about their metabolism . And …

Four Researchers Join JGI User Executive Committee

… and initiation of the Genomic Encyclopedia of Bacteria and Archaea (GEBA) project. As a UEC member, he aims to help the …

Dan Rokhsar

… Publications … Selected Publications …

Genomic Encyclopedia of Bacterial and Archaeal Type Strains, Phase III: the genomes of soil and plant-associated and newly described type strains

Lawrence Berkeley National Laboratory is a U.S. DOE Office of Science
national laboratory managed by the University of California.