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Plant-Microbial Interactions Group
… of plant/environmental responses … Selected Publications … Research Team Alumni … For further details, …
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A One-Stop Shop for Analyzing Algal Genomes
… genes of more than 100 algae. The Science Interested in the genomes of algae? You now have one place where you can … and enthusiasts to look deep into more than 100 algal genomes, compare them, and visualize supporting experimental … reinforces the JGI’s new strategic focus on exploring algal biology, diversity, and ecology. PhycoCosm has many …
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User Advisory Committees
All staff members of the US Department of Energy (DOE) Joint Genome Institute (JGI) commit to Lawrence Berkeley National … and strategic objectives of the microbial and metagenome programs. The committee serves as the program's key …
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Sequencing Sphagnum Leads to Discovery of Sex Chromosomes
New research identifies sex chromosomes in the plant and illuminates the significant role sex plays in how the moss … change. Researchers at the U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility at … HudsonAlpha Institute for Biotechnology sequenced sphagnum  genomes from plants selected by a team from Duke University, …
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Building Sphagnum Genomic Resources
… researchers are aiming to have two high quality reference genomes for peat-forming species that occupy different … – Sphagnum fallax and S. magellanicum. The draft genome for  S. fallax is already available on the  JGI plant portal Phytozome , and the S. magellanicum genome is currently being assembled. These resources would …
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Programs & Platform Leads
As an Integrative Genome Science User Facility, the JGI plays a leadership … the boundaries of the Plant, Fungal, Algal, Microbial, Metagenome, Metabolomics, Secondary Metabolites, and DNA …
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High functional diversity among Nitrospira populations that dominate rotating biological contactor microbial communities in a municipal wastewater treatment plant
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Refinement of the “Candidatus Accumulibacter” genus based on metagenomic analysis of biological nutrient removal (BNR) pilot-scale plants operated with reduced aeration
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SPRUCE-ing Up Science
… one of the first students to participate in the DOE Joint Genome Institute (JGI)-UC Merced internship program, … brings a bioinformatics expertise, a combination of biology and computer science, to reveal clues about how … fine tune his approach. “I got a lot of that from Zhong.”   Publication: Carrell AA et al. Habitat-adapted microbial …
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Model Fern Reveals Insight into DNA Thievery in Ferns
Open Green Genomes hits milestone with C. richardii The Science Fern genomes are huge, and incredibly complex — making it … grasp a deeper understanding of fundamental aspects of fern biology and, more broadly, land plant evolution. Recent …
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Tour the IGB
Take a virtual tour of the IGB, home of the DOE Joint Genome Institute. To navigate virtual tours of each floor, …
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2024 Progress Report
Genomics Building (IGB) seen above is home to the DOE Joint Genome Institute (JGI). Researchers from the DOE Systems Biology Knowledgebase (KBase), the National Microbiome Data … processed 13,700 metabolomics samples With our users, 247 publications were published   … Our primary objective is to …
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