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Viral dark matter and virus–host interactions resolved from publicly available microbial genomes
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MetaBAT, an efficient tool for accurately reconstructing single genomes from complex microbial communities
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Genomic insights into redox-driven microbial processes for carbon decomposition in thawing Arctic soils and permafrost.
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Metagenome-assembled bacterial genomes from benthic microbial mats in ice-covered Lake Vanda, Antarctica
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Getting to the Bottom of Fungal Functions Across Earth’s Forests
… researchers have leveraged data from the 1000 Fungal Genomes project to form new connections between fungal … and developed new tools to map that soil RNA to fungal genomes.  The U.S. Department of Energy (DOE) Joint Genome … common to forests around the world, as well as meadows and pastures: saprotrophs disassemble debris and dead organisms …
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Applying Viral Genomics Expertise to Understanding the Human Virome
… order of magnitude. For years, scientists at the DOE Joint Genome Institute, a DOE Office of Science user facility … in developing and maintaining the JGI’s  Integrated Microbial Genomics and Microbiomes (IMG/M) system. The … and understanding viral genomes and their interactions with microbial hosts. The second project, “ A consortium …
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JGI@25: Strengthening Soybean
… and energy advantages explain why soybean is a flagship genome of the JGI’s Plant Program.    While soybean has … the first legume species with a published complete draft genome sequence. At the time, the vital global source of … soybean.”  Upon its initial release in 2009, the soybean genome sequence immediately spurred further research and …
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Optofluidic Raman-activated cell sorting for targeted genome retrieval or cultivation of microbial cells with specific functions
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IMG/M v.5.0: an integrated data management and comparative analysis system for microbial genomes and microbiomes
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Dissecting the dominant hot spring microbial populations based on community-wide sampling at single-cell genomic resolution
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A Grass Model to Help Improve Giant Miscanthus
… of polyploidy and perenniality. The Science A reference genome sequence and genomic toolkit for the perennial grass  … Miscanthus sinensis has been published. Analysis of the genome sequence also provides insights into how the multiple … environments such as poor soils and drought. The reference genome for  M. sinensis,  and the associated genomic tools, …
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Jane Grimwood Named HudsonAlpha Genomics Chair
City. Grimwood is also co-director of the HudsonAlpha Genome Sequencing Center. Grimwood heads the Library … soon after the JGI was established to work on the Human Genome Project in 1997. She was a group lead at Stanford Human Genome Center directed by Richard Myers, and among the …
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