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Relationships between fluid mixing, biodiversity, and chemosynthetic primary productivity in Yellowstone hot springs
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Distribution and abundance of tetraether lipid cyclization genes in terrestrial hot springs reflect pH
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Tracking the Origins of Methane-Producing Microbes
… the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science user facility, report the discovery of a novel archaeum from a hot spring that has the genetic machinery to perform … archaea. The Quake lab had previously collaborated with the JGI on a proposal using this approach through the Emerging …
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Guidelines for public database submission of uncultivated virus genome sequences for taxonomic classification
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The Expanding Universe of Methane Metabolisms in Archaea
… the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility, for publicly … of Life Symposium in April, which immediately precedes the JGI’s 14th Annual Genomics of Energy & Environment Meeting. … were identified in thermal sediments from Washburn Hot Springs in Yellowstone National Park. This large geothermal …
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Protocols
Find protocols provided by JGI and the JGI user community below for DNA preparation tools, high molecular-weight DNA extraction and RNA preparation.  JGI sample QC protocols can be found here . DNA Extraction …
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Engagement Webinar: Harnessing JGI’s Metabolomics Capabilities
The JGI Engagement Webinar held November 5, 2020 (watch the  … The webinar featured  Trent Northen and Ben Bowen of the  JGI Metabolomics Program , along with Jenny Mortimer, … How long does it take to do all the analyses? A:  For the JGI  New Investigator and  Functional Genomics proposal …
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Leadership
… the direction of programs and initiatives to enhance the JGI’s preeminence as a national resource. Members report to the JGI Director. …
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High Five: Celebrating the JGI-UC Merced Genomics Internship Program
UC Merced students have contributed to the research of 13 JGI scientists since the program’s inception. In 2014, JGI’s Zhong Wang and Science Programs Deputy Axel Visel … updates. Here are a few of the highlights: Mario Banuelos (2017 graduate intern): Assistant Professor of Mathematics at …
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Scaling Up Existing Skill Sets
Over the course of the summer, the JGI-UC Merced Genomics Internship paired six UC Merced … in the Biophysics program. (Graduated from UC Merced in Spring 2019.) Mentor: Ben Cole, Genomics of Plant-Microbial … JGI intern for a second time since participating in summer 2017 ( read more here on her previous experience) has …
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David Goodstein
… equipment manufacturer KLA-Tencor before joining the JGI in 2002. Initially focused on building tools to … progenitors. Nature Communications 11, 1. Gordon et al., 2017.  Extensive gene content variation in the Brachypodium … plant genomics.      Nucleic Acids Research 40, D1178. Publications … Scientific Advisory Board member, InterMine …
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John Vogel
Dr. Vogel joined JGI in 2014 to establish a plant functional genomics …  https://doi.org/10.1111/nph.15662 Gordon, et. al. 2017 Extensive gene content variation in the Brachypodium … Visiting Fellowship Australia … Education … Selected Publications … Awards and Service …
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