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Doubling Down on Known Protein Families
… big the room is.  A new study  published online Oct. 11, 2023 in  Nature highlights the vast array of functional … Alexander Fleming. “This was a massive analysis of 1.3 billion proteins with massively parallel computations.”  … we’ve already defined.  “A huge percentage — around 30–50% of the protein families that we knew so far — still does …
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JGI@25: A Single Cell, Myriad Microbial Discoveries
In honor of the JGI's 25th anniversary in 2022, we have revisited a number of … more than 200 microbial genomes that were mapped to nearly 30 major previously uncharted branches of the tree of life. …
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iPHoP: A Matchmaker for Phages and their Hosts
… to generate a matrix of data points.  Applied to 216,015 high-quality virus sequences in the IMG/VR database, the … Program awarded under UC-DOE Prime Contract DE-AC02-05CH11231. The work conducted by the U.S. Department of Energy Joint Genome Institute (https://ror.org/04xm1d337), a DOE Office of Science User Facility, is supported by …
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JGI-UC Merced Interns Share Their 2021 Experiences
During the summer of 2021, 13 interns from UC Merced spent eight weeks working virtually …
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JGI announces 2024 Functional Genomics awardees
… are accepted year-round; the next deadline is Jan. 30, 2025. …
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Fishing for Novel Cellulose Degraders
User Facility, is supported under Contract No. DE-AC02-05CH11231. The work was supported by a JGI Director’s Science … by the NIGMS Biotechnology Training Program (NIH 5 T32 GM008349) at the University of Wisconsin – Madison. This work …
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Emiley Eloe-Fadrosh
Institution of Oceanography … Vyshenska D, et al. 2023. A standardized quantitative analysis strategy for stable … microbiome research community standards. Nat Microbiol . 8(5):751-753. Nayfach A, et al. 2021. A genomic catalogue of … ZoBell Fellowship, Scripps Institution of Oceanography, 2008 Lewis and Clark Field Scholar, NASA/American …
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Enlarging Windows into Understanding Gene Functions
Technologies Group. In an article published November 25, 2021 in Nature Methods , JGI researchers led by co-first …
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Identifying the Microbial Cleanup Crew at a Superfund Site
… understand the ERD process.  … The work (proposal:  10.46936/10.25585/60000717 ) conducted by the U.S. Department of Energy Joint Genome Institute (JGI) ( https://ror.org/04xm1d337 ), a DOE Office of Science User Facility, is supported …
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You Can Move, But You Can’t Hide
JGI’s  IMG Virus Resource (IMG/VR) , now with more than 15 million viral genomes. It was also key to developing the … of Energy Joint Genome Institute (https://ror.org/04xm1d337), and the National Energy Research Scientific Computing …
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For the Tiniest Archaea, A Genomic Switch of Friend or Foe
Frontiers Group, the National Science Foundation (MCB-1244557 to J.A.D.) and the Lawrence Berkeley National … Area funded by the US Department of Energy (DE-AC02-05CH11231 to J.F.B.). The work ( proposal doi: 10.46936/10.25585/60000800 ) conducted by the U.S. Department of Energy Joint …
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The JGI announces 2024 awardees for our Community Science Program annual call
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