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Dr. Louie joined the JGI in 2014 to develop the metabolomics program, and in 2019 became Platform Lead where she manages metabolomics … products. Proc Natl Acad Sci U S A. 2021;118. doi:10.1073/pnas.2019855118 2. Murphy KM, Edwards J, Louie KB, Bowen …

… (MAO), Institute for Collaborative Biotechnologies grants W911NF-09–D-0001 and W911NF-19-2-0026 (MAO), US Army Research Office …

Microscale Applications group. Before joining the JGI in 2010, he made the first ever measurements of in situ growth … for stable isotope probing metagenomics. mSystems 8:e01280-22. Volland et al. 2022.   A centimeter-long bacterium with … archaeal− bacterial consortia. PNAS 113 (28), E4069-E4078 Bendall, M.L. et al. 2016. Genome-wide selective sweeps …

… metabolisms is “vastly underestimated.” In the March 4, 2019, issue of Nature Microbiology , they mined the Integrated … by the other study co-authors, and reconstructed from these 10 metagenome-assembled genomes (MAGs) representing new … Marker genes for diverse methane metabolisms Of the 10 MAGs reconstructed in the study, five were from …

… and the fact that I got to do a project involving over 12,000 fungal genomes was just really, really exciting for …

For the Joint Genome Institute, the end of 2018 was marked by a celebration of contributing over one … data repositories over its now 20-plus-year history. In 2019, the countdown has begun to the June dedication event of … Maxon, Biosciences Associate Laboratory Director, of the 100-page document with over 200 actionable milestones. JGI …

… californiae , and Piromyces finnis . In work reported in 2017, the fungal genomes were sequenced by the U.S. Department … Research and operated under Contract Nos. DE-AC02-05CH11231 (JGI) and DE-AC05-76RL01830 (EMSL). CLS is also …

As part of the JGI’s 25th anniversary celebration, the 2022 Annual Meeting featured speakers who shared a look back … the Department of Energy (DOE) colleagues. “At that time (1986) 98% of the human genome was thought to be junk DNA, so … Health that this effort would prove invaluable. By the mid-1990s, the sequencing efforts expanded beyond LANL to …

… how big the room is.  A new study  published online Oct. 11, 2023 in  Nature highlights the vast array of functional … Center  Alexander Fleming. “This was a massive analysis of 1.3 billion proteins with massively parallel computations.”  …

In honor of the JGI's 25th anniversary in 2022, we have revisited a number of notable achievements that … single cell – a symbiont of the green sharpshooter. In 2012, single cells isolated from the microbes found in the oil … microbial populations in oxygen minimum zones identified SAR11 bacteria as initiators of nitrogen loss in these waters. …

… these different routes. To train the model, the team used 1,870 known virus-host pairs to generate a matrix of data points.  Applied to 216,015 high-quality virus sequences in the IMG/VR database, the …