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Nigel Mouncey
… and today, focuses on continuing to build and position JGI as a leading integrative genome science user facility.  In addition to serving as JGI Director, Dr. Mouncey leads his own science group at JGI focused on secondary metabolites. He is also on the … is the Secondary Metabolites Program head as well as our JGI Director. Click to learn more about the program's areas …
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IMG/VR
… JGI's Simon Roux describes the structure and content of the IMG/VR v3 database (img.jgi.doe.gov/vr), the latest release of IMG database …
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Pinning Down a Piece of Photosynthesis
… dependencies, intricate connections, and many, many moving parts. A lot of these moving parts are proteins — amino acid structures that … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … and environmental characterization and cleanup. The JGI provides integrated high-throughput sequencing and …
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Partnerships: Myco-Ed
… DNA is extracted from samples, which is then sent to the JGI for genome sequencing, assembly and annotation. … and distribution of fungal genome datasets. It includes JGI-sequenced and publicly available datasets encompassing a …
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2025 NeLLi Symposium
… enable researchers to discover novel lineages of life and move from the identification of microbial novelty to … to assign functional “read out” to sequence data. Moving from cataloging microbial diversity to experimental … JGI Organizers …
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Outreach Stories
… Interested in reading more JGI intern and mentor success stories? Read more below. …
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User Executive Committee Charter
… The JGI User Executive Committee (UEC) represents the JGI user community and is responsible for providing input and advice on JGI policies and practices that affect users and their …
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Uncovering Novel Genomes from Earth’s Microbiomes
… the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … the samples we analyzed.” Emiley Eloe-Fadrosh, head of the  JGI Metagenome Program and senior author on the study … on the JGI’s  Integrated Microbial Genomes & Microbiomes (IMG/M) platform. Eloe-Fadrosh noted that it was a nice …
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Plotting a Model for Virus-Host Warfare Deep Below Ground
… the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … researchers surveyed publicly available data in the JGI’s  IMG/M database , information the Probst lab used to search … the cells, which then burst, spreading the virions out and moving the carbon within the microbial community. These …
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Nikos Kyrpides
… analysis platforms for microbial genomes and metagenomes (IMG). He became the Metagenomics Program head in 2010 and …
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Mining Public Databases Yields Largest Map of Fungal Mitochondrial Genomes to Date
… By leveraging new tools and large-scale data mining, JGI researchers nearly tripled the available fungal … across all fungi, and found that some of these genes have moved from the mitochondria into the nuclear genome over … over 26,000 publicly available metagenomes in the JGI's IMG portal for mitochondrial ribosomal RNA sequences. The …
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Toward More Efficient Artificial Photosynthesis
… photosynthesis pathway that would more efficiently remove carbon from the atmosphere than current natural … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … the Erb lab through the CSP Functional Genomics call, the JGI synthesized library of genes that code for Enoyl-CoA …
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