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Bacteria and Fungi Divvy Up the Work in Forest Floor
… down tough plant fibers. The Science Walk in a temperate forest filled with Norway spruce trees, and microbial … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … work was supported by the Czech Science Foundation (18- 25706S and 20-02022Y), by the Ministry of Education, Youth …
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Assembly of Robust Bacterial Microcompartment Shells Using Building Blocks from an Organelle of Unknown Function
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Understanding Wildfire Recovery, Starting in Soil
A metagenomic look at the soil microbes present a year after a wildfire. The … published in Nature Microbiology , went a step further, using both DNA and messenger RNA (mRNA) sequencing to … and growth.  This study builds on the pyrophilous fungi the JGI has previously sequenced , and provides a powerful …
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NeLLi — Symposium on New Lineages of Life
… into the most recent expansions of the Tree of Life and latest discoveries toward the evolution of cellular … biomedicine, as well as biotechnology. NeLLi August 24 – 25, 2023 Session Speakers:   Laura Hug , University of … (NIOZ) Nicole Poulton , Bigelow Laboratory of Ocean Sciences Roland Hatzenpichler , Montana State University   …
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Marine Microbe Contains Multitudes
Pacific Subtropical Gyre, microbes tend to stay localized at different depths. But SAR324 can be found throughout the … at the U.S. Department of Energy Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … Science Program . The metagenomes were also processed using the JGI-developed software suite, BBTools , and …
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JGI User Executive Committee Expands
… of the U.S. Department of Energy Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National Laboratory (Berkeley …
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Protein structure determination using metagenome sequence data
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Enlarging Windows into Understanding Gene Functions
JGI innovates protocol revealing how genetic variations in sequences … Technologies Group. In an article published November 25, 2021 in Nature Methods , JGI researchers led by co-first … TFs and regulatory networks are conserved across fungi.” Using multiDAP-seq, Nagy’s team is comparing five fungal …
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Here, There and Everywhere: Large and Giant Viruses Abound Globally
JGI-led team significantly expands the global diversity of … and giant viruses. While the microbes in a single drop of water could outnumber a small city’s population, the number … viruses from environmental sequences across the globe, then using these sequences to make inferences about the …
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JGI Workshop at SIMB NP Meeting
… intensive. This is often due to, for example, tight regulation of biosynthetic gene clusters (BGCs) in native hosts, … available genome sequences. The DOE Joint Genome Institute (JGI), a DOE Office of Science User Facility, has been developing and applying new …
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JGI Workshops at PAG
… is rising. The purpose of this Workshop is to illustrate the expansion of this field and bring it to the … genomics community. Jan. 13 workshop: BER Plant Genomic Science In this workshop, we will present current and ongoing developments at the JGI and KBase toward integrative biology and hear from …
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JGI Interns at UC Merced Earn CAMP Merit Awards
As part of the ongoing partnership between DOE JGI and UC Merced to promote diversity and inclusion in science and research, two undergraduate students from UC Merced recently had summer internships …   “It is a beautiful thing, that our young campus earned 25% of the research awards,” said Jesús Cisneros, director …
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